Pseudomonas fluorescens AU5633, AA066_RS06845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU5633 Contig_43, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCAACCGTGCGGCGGAGGAGGGCATCGGGGCCCGCGACAAACTGTTCGTGCAGGAAGGCCGCAAGGTGTTCAAGGACGTCTGCCCGATGGTCGCCGAG CTGATCGGTGAGCATCTGGAAGAGAACAAACTCAACGTCGGCGACGTCAAGCGCTTCTGGCTGCACCAGGCCAACCTGAGCATGAACCACCTGATCGTGC GCAAGCTGCTGGGCCGTGAAGCCACTGAAGAAGAAGCCCCGGTGATTCTCGACACCTACGCCAACACCAGTTCGGCGGGCTCGGTCATTGCCTTCCATAA ATATCAGGACGATCTGGCCGCCGGTTCGCTGGCCGTGCTGAGCTCGTTCGGCGCCGGTTACTCGATCGGCAGCGTGATTCTGCGCAAGCGCTGAGTGCGC CTGAAAAGATCGCAGCCTGCGGCAGCTCCTACACTGATCTCTGTAGGAGCTGCCGCAGGCTGCGATCTTTTGCTTTCGACCATCTGAAAACGAGGCGCGC
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| DNA Sequence for Gene |
>AA066_RS06845
ATGGCCGCAACGGACGACACCCAACTGCTCGAACGCCTGTTGGCCGGTGAGCAAAAAGCTTTCAAGGAACTGGTCAGCACCTACCAGAGCGCCATGCGTG CTGTGGCTTACGCGATTGTCGGCCAGCGCCATGTCGAAGAAGTGGTGCAGGACGCCTGGCTTTCGGTGGTGCGCCACATCGGTAGCTTCGAGGGCCGTTC CAGTCTCAAGACCTGGCTGCTGACCATCACTGCCAACTCGGCCAAGAGTCGTTACAAACAAAATCGTCGCGAAGTCTTGATGGATGACCTGCCGTCACCC CACGGCACCATCGACGATGACCGCTTTTCTCCCGGTGACGGTCATTGGCTGGTGGCGCCGTTCGCCTGGCATCAGGACACGCCGGAAGCCTTGCTGACGG AAAGCGAATTGCGCGACTGCCTGGAGCACACCTTGCTCAGCCTGTCGGAACTGCAAAGCAGTGTTTTGCTGCTGCGCGAGCGTCAGGGCCTGGAGCTGGA GGAGATCTGTAATCTTCTGGAGATCTCGCTCTCCAATGTCCGTGTGCTGCTGCATCGTGCGCGGCTGAAAGTCTTCGCCACGGTGGAGCATTTTGAGGAG ACCGGCGAATGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGCAAGGAACAAGTAGCGCGCTCCAGCGATTACCTCGATGGCCAGTTGAGCTTTCGCGAGAGACTGTTGGTGCGCCACCACCTGATGTTCTGCCCCAA CTGTCGGCGTTTCATTCGCCAGATGCGTTTGATGCAGGCCACATTGAAGGCGATGCCGGAGAAAACCGAGGCGGGTATTGACGCTTTGGCCGAACGCCTG GCCGAGCAACGCCGCAAAGAAAAATAGAGCCCCCTGTAGGAGCTGCCGGAGGCTGCGATCTTTTGATCCTCAAAAACAAGATCAAAGGATCGCAGCCTCC GGCAGCTCCTACAGTGTTCTTGCATCTTGCAGAAATAGCCCGACGCGGATGAAACGAACGGATGATGGGGATCGTCCCGCCCGCGTCAGGCTACAGGTGA CGCTTTTTAGAACTTCGCTTCCGCGTCCAGCTGCAGGGTGTTGGTGTCTGCGTCACGCTGGGTACGGCTGGAGAAGTCGGCCTTGGTCAGGAAGTAGGTG
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| Amino Acid Sequence |
>RNA polymerase subunit sigma-24
MAATDDTQLLERLLAGEQKAFKELVSTYQSAMRAVAYAIVGQRHVEEVVQDAWLSVVRHIGSFEGRSSLKTWLLTITANSAKSRYKQNRREVLMDDLPSP HGTIDDDRFSPGDGHWLVAPFAWHQDTPEALLTESELRDCLEHTLLSLSELQSSVLLLRERQGLELEEICNLLEISLSNVRVLLHRARLKVFATVEHFEE TGEC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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