Pseudomonas fluorescens AU5633, AA066_RS06085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_43, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTGTCTGAATTGCGGTGCCTGCTGTTCCCATTTTCGCGTGTCTTTTTTCTGGGGTGAATGCGCCTCCTCCGGTGGCACAGTGCCCGATGAGCTGGTGAC GCAGATCAGCCCGAGCCGGGTGGCGATGAACGGCACCGATTGCAAATCACCGCGTTGTACGGCGCTGGTCGGCGAGGTGGGCAGTCAGGTCCAGTGCTCG ATTTATGAGCAGCGCTCCAGCCCCTGCCGCGAATTCGAATCGTCCTGGGAGAACGGCGAACAGAATGTCGATTGCGACAAGGCCCGCGCCCGCTTCGGCT TGCCGCCGCTCGAGAAGGACTGGAATCAGATCCCCTACGACCAGAGCGCCTGACGCTTAGCGCCAATCGCTATGAGGCTCATGCCGAAATGGTTGCCGCC AATATGCCACTATCGCTTGCACGATAAAAACCGCCTCTATACTCCTCTCATTCGCCTGCGTTTCTGACGCAGAAGGGACGACTTCAGAGACGGGGATGCT
DNA Sequence for Gene
>AA066_RS06085
ATGGAGTGGCTTGGTTTGCAGTTTGTTACCGAGCTGCCGGACGGCGGGCAGGTCATTCTCGATTGCACACATAATCCCTTGCTGGTGCTGGTGGCTTATC TGGTCGCCTGCGCCGCGAGTTTTGCCACCCTCGACATGGCCGAGCGGGTCGGCCATGCCGAAGACCCGGGCTCGCAACGGGTCTGGCGCTGGATCGGCGC CACTTGCCTGGCCGGCGGTATCTGGGCCATGCACTTCATTGCCATGCTGGCGTTCCAGACCCCGATCGAAATCCATTACGAACTGGCCACCACCCTGTTT TCCCTGGTGATCGCCCTGCTCGCTTCGTGGCTGGCGATGCACACCCTGAGCGTGCCCCATCCCTCACGGGTGCATTACCTGAAAACCGCCATCGTCATTG GCTTGGGCATAGCCGGCATGCATTACGTCGGCATGGCGGCGATGCACTCGGTGGCCACCGCCTATTACGAGCCGCTGTTGTTCTGCCTGTCGATCGTGAT TGCGATCAGCGCCAGTTTCGCCGCGCTGTGGGTCGCCGGTTACTTGCGTGAAGGCAGTGGGCGTTTTCATCAACTGTTCAAATACACCGCCGCGATCATC CTCGGCGCCGGCATCATCAGCATGCATTTCACCGGGATGGCCGCGTTGCATCTGGTGTTGCCCGAAGGCGCCACGCCCACATTGAGTGCCGAAACCAATC ACCTGCAACTGGGCCTGACCATCGCGCTGATCACACTGTTGATTCTCGGCAGCGCGATCAGCGCGGCACTGGCCGACAAGAAACTGCAGAGCAAGGAGCA GGATCTGCGCCGAGTCAATGCCCTGCTCAGCCAGCTCGATCAGGCTCGGATGTCGCTGCAACAAGTGGCCAATTACGACGCCCTGACCAACCTGATCAAC CGTCGCGGTTTCAACCAGATCTTCGCCGAGAAACTCAGCCAGAAAACCAGCGAAGGCGGCATGCTCGCGGTGATGTTTCTCGACATCGACCACTTCAAGC GGATCAACGACAGCCTCGGCCATGACGCCGGCGACGCCCTGCTCAAAGTGATCGCCAACCACATCAAAGGCTCGGTGCGCAGCCATGACGACGTGGTCGC ACGCTTTGGCGGTGACGAGTTCTGCATCCTGATCGGCCTGCACGACCGCGAGGAAGCGCGCAGCATGGCGCAACGGATCATGCAGAAAATGAAGGAGCCG ATCGAACTGGCCGGACGTCGTATGGTGATGACCACCAGCATCGGCATCAGCCTGTTCCCCGACGACGGCACCACCTGCGAAGAACTGCTCAAGCACGCCG ATCTGGCGTTGTATCAGTCCAAGGGTGCCGGGCGTAACGGCCTGCATTTTTTCAGTTCGAACATGAAGACCCGCGCCAGCCTCGAACTGCAACTGGAAGA AGAACTGCGCCAGGCTTTGCGTGAAGACCACGGGCTGACGCTGTATTACCAACCCATCTTCGAACTGAAAACCGGCCGGGTGACCAAACTCGAAGCGTTG ATTCGCTGGCAGCATCCGCTGCATGGCCTGCTGGCCCCGGACCGTTTCATCGCGATTGCCGAAACCAACGGCCTGATCGCCGAACTGGACAACTGGGTGT TGCGCCGGGCCTGCACCGACCTCGGCGAACTGACGCGCCACGGCTGCAACGAACTGAAAATCGCCTGGAACTGCTCACCGCTCAACCTGGCCCGGGAAGA ACTGGCCAACGAAATCGAAAGTGCACTGCGCAGCGCTGGCGTCGCGCCGGAACGGCTGGAGCTGGAAGTCACCGAAAACGCGCTGATGGGCAACATCGCC AACACGCTGGTGCTGTTGCGGCAGATCCGGGCCCTCGGCGTATCGCTGTCGATCGACGACTTCGGCACCGGATACTCATCATTGGCCTACCTCAAACGCC TGCCGCTCAATACGCTGAAAATCGATCGTTCGTTCATCCTCGACATTCCTGCGGCGACTGCCGACATGGAGATCGTCCAGGCGATCATCGTCATGGCCCA CACCCTGCACTTGCAGGTGGTGACCGAAGGCGTGGAAAGCCTGGAGCAGTACGAGTTTCTCGAACGTTCGGGCTGCGACTTCATTCAGGGGTATCTGCTC AGCCGCCCGGTGCCGCTGGATGAACTCCGTCCGGTGCTCGAGGAAATCAATCAGCGCAAACACGCACATTCGGTCAATCCACTGAGTCTGGCGCGCGGTA CAGGTGTACCAGAGTCGCTGGATCCTTCTGCAAAAAACCCTGCGCCCCATGCAGGCGCATCAGTTGTGCGGCCAATCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGTGGCCGAGCCTTGTTCGCGGGAGAATTTCACCGCCGTATCGAGATCCTTGAGCAGCGTGCGCACGTGCCATTTCACCGGTTCAAAACGGCTTTC GGCCATTTGCGGGGCGAGGATCTGCAGCGGTTTCGAATCGGCAAAACCACCGGCCAGCGCTTCGGCAATCAGGCGCGCATCGACTCCGGCCTGTTCGGCC AGCGCGACCACTTCGGCAATCACCAGCGCGTTGCAGGCGACGATCATCTGGTTGCAAGCCTTGGTCACCTGCCCGGCGCCGATGCCCCCCATGTGCGTGA CACGCTGACCGAGGCTGAGCAGCACCGGGCGCACCCGATCCAGATCCGTCACCGCACCACCGACCATGATTGCCAGGTTGCCCGCCTCGGCACCGGCCAC GCCGCCGGACACCGGTGAATCAAGCCAGGCCATGCCGGTTCTGCCTGCCAAGTCGGCGGCCATCTCGCGAGTAGCCGTCGGTTCGAGGCTGGAGAAGTCC
Amino Acid Sequence
>diguanylate phosphodiesterase
MEWLGLQFVTELPDGGQVILDCTHNPLLVLVAYLVACAASFATLDMAERVGHAEDPGSQRVWRWIGATCLAGGIWAMHFIAMLAFQTPIEIHYELATTLF SLVIALLASWLAMHTLSVPHPSRVHYLKTAIVIGLGIAGMHYVGMAAMHSVATAYYEPLLFCLSIVIAISASFAALWVAGYLREGSGRFHQLFKYTAAII LGAGIISMHFTGMAALHLVLPEGATPTLSAETNHLQLGLTIALITLLILGSAISAALADKKLQSKEQDLRRVNALLSQLDQARMSLQQVANYDALTNLIN RRGFNQIFAEKLSQKTSEGGMLAVMFLDIDHFKRINDSLGHDAGDALLKVIANHIKGSVRSHDDVVARFGGDEFCILIGLHDREEARSMAQRIMQKMKEP IELAGRRMVMTTSIGISLFPDDGTTCEELLKHADLALYQSKGAGRNGLHFFSSNMKTRASLELQLEEELRQALREDHGLTLYYQPIFELKTGRVTKLEAL IRWQHPLHGLLAPDRFIAIAETNGLIAELDNWVLRRACTDLGELTRHGCNELKIAWNCSPLNLAREELANEIESALRSAGVAPERLELEVTENALMGNIA NTLVLLRQIRALGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFILDIPAATADMEIVQAIIVMAHTLHLQVVTEGVESLEQYEFLERSGCDFIQGYLL SRPVPLDELRPVLEEINQRKHAHSVNPLSLARGTGVPESLDPSAKNPAPHAGASVVRPIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site