Pseudomonas fluorescens AU5633, AA066_RS23560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_41, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACGGTGTGGGAACTGGACGGGCCGATGCCGATTTTGAACAGGTCGAAAACGCTGATAGCCATTGCTGCAGAGCTCCTGAGGATGCCGTTCCCGGGCGT TAAGCGCCCGCTGGCGGAGCTGCTACGCTCAAGCTGCGATCCGCCGGAATGCCCGCATCATCAGGCTTTTGTCAGGTCGCCCGGCGTCTGACACCGACGC ACTCATGCCCACCAACGCCGTGCCGGTTTGCTCCCGTGTTTTCGCCGTTTTTATGCGGTTCAGATGGCCAAACGGGGTAGAAAAAAGCTGTAAACGACGT CACTGACACTGGATGCGACCATCCCTGTACTGGATACGACCCACCCTGTAGGCGTCAGATTTTCACTGGTACATGATCGTTATGACTCGATTGCAAGGCG CCGTGGTAGAGCTGTCTCCAGAACGCCATCCAACCGCAACCTATAAGTGCGGTGGTCCACAGTCGGAACACTGCCAAAAAAAACACCAAGGAGTCCATCC
DNA Sequence for Gene
>AA066_RS23560
ATGAAAGGTTCCCCGTCGTTGTTGTTGGCCGCCATGCTGAGTCTGCCGTTACTGGCTCACGCTGCAGAACCCGCTCAGTGCAGTACCGTGAACTTCTCCG ATGTCGGCTGGACCGACATCACCGCCACCACCGCCACCACTTCGGTGGTACTCGACGCCCTCGGCTACAAGACCAAGACCACCATGATCTCCGTGCCCGT GACCTACAAGTCGCTGGCCGACGGCAAGAACATGGACGTGTTCCTCGGTAACTGGATGCCGACCATGGAAAACGACATCAAGGCCTACCGTGATGCCGGC ACCGTCGAAGTGGTGCGCACCAACCTCAAGGGTGCCAAGTACACCCTCGCCGTACCGCAAGCCCTGTACGACAAGGGTCTGCATGACTTCGCCGATATCG CCAAATTCAAGAAAGAGCTCGACGGCAAGATCTACGGCATCGAGCCCGGCAATGACGGTAACCGCCTGATCCAGAGCATGATCGACAAGAACGCGTTCGG CCTGAAGGACGCCGGTTTCAAAGTCGTCGAATCCTCCGAGGCGGGCATGCTCTCGCAGGTTGACCGCGCACAGAAACGCGACACCGCCGTGGTCTTCCTC GGCTGGGCGCCGCACCCGATGAACAAGCGCTTCAAGATTCAATACCTGACCGGCGGCGATGACTTCTTCGGCCCCGATTTCGGTGCTGCGACCGTGGCGA CCAACACCCGCAAGGGTTACACCACTGAATGCAGCAACGTCGGTCAGTTGCTGAAGAACCTGGAGTTCACCGTCGACATGGAAAGTACCCTGATGGGCAA CATCCTCGACGACAAGATGAAGCCTGAAGCGGCCGCCAAGGCCTGGCTGAAAAAGAACCCACAGGTGCTCGATACCTGGCTCGCTGGCGTGACCACCATT GACGGTAAACCTGGCCTGGAAGCCGTGAAAGCCAAGCTCGCACAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCCTTACGCCGGGCGAGTTCGCTCGCCCGGGCTGTTTATTCCTTGCATGCGGACGTTCACTACCATGCTGATTGATCAGAAAATCCCTTTAGGCCAGT ACATCGCGGGCTTCGTTGAATGGTTGACGCAACACGGCGCCAGCACCTTCGACGCAATCGCCGTGACTCTGGAAACGATGATCCACGGCGTGACGTTTGC GCTGACCTGGTTCAACCCGCTGGTGCTGATCGGCCTCATCGCCCTGCTGGCCCACTTCATCCAGCGCAAATGGGGACTGACGGTATTCGTCATCGCCTCG TTCCTGCTGATCCTCAATCTGGGTTACTGGCAGGAAACCATGGAAACCCTCGCCCAGGTCATGTTCGCGACCCTGGTCTGCGTGGTCATCGGCGTGCCGC TGGGCATCGTCGCCGCGCACAAGCCGATGTTCTACACTTTAATGCGTCCGGTACTCGATCTGATGCAGACCGTACCGACCTTCGTTTACCTCATTCCTAC
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MKGSPSLLLAAMLSLPLLAHAAEPAQCSTVNFSDVGWTDITATTATTSVVLDALGYKTKTTMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKAYRDAG TVEVVRTNLKGAKYTLAVPQALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSEAGMLSQVDRAQKRDTAVVFL GWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGYTTECSNVGQLLKNLEFTVDMESTLMGNILDDKMKPEAAAKAWLKKNPQVLDTWLAGVTTI DGKPGLEAVKAKLAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site