Pseudomonas fluorescens AU5633, AA066_RS20855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU5633 Contig_38, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGCGAATCTGCAGAGCTGTCATACGCTCGGCCACCGCGTTGTTTTGCCTTTGCGGGCACGGTGCCAGGCCTGGACAGCCCTTTTTTGAGGTTCACGTC TTCAAAAGAGCGTGAAAAAAACGGGTTTTCACAACTTCACAAGAGTGTGGCGAGCAAATGAATAGTTTTGCGTCTGAACATGCACCATTAGCGTCTGTAA CAGCCCAACGACACAGGACCGGGGATACCTCGAACATCGGAGCCTGAAGCCTGTCCGCTACGGATTTGGTTGCACAAAACGGATGTCTCGACCATAAGTC GAATTGCCAGCCGCGCGCTGAAATGAGTTCATGCAACTCTTGAAGCCAGGCCGCATGCATCCGTCGAAGTTGCGAAAAATTGCGAAGATTCGGACATGAC GAACCTGACCATGGGTTATCCGGGGCGCAACTGACCTGCCCCGCCACTCCCTGGCAGCCATGCCGACAATTTGGTGCTGCAGATTTTGGAGACGCGTTAA
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| DNA Sequence for Gene |
>AA066_RS20855
ATGGCGCATAACGAAGCAGTCGACGTAGTTCTGGTTGGGGCCGGCATCATGAGTGCCACCCTGGCAGTACTGCTCAAAGAACTCGACCCGACGATCAAGC TGGAAGTCGTCGAGTTGATGGATTCCGGGGCCGCGGAGAGTTCCAACCCGTGGAACAACGCCGGTACCGGCCACGCCGGCCTGTGCGAGCTGAACTACAC GCCGCAGGCCGCCGACGGCAGCGTCGACATCAAGAAAGCCGTGCACATCAATACCCAGTTCGAAGTGTCCAAGCAGTTCTGGTCGTACCTGACCAAAAAA GGTACCTTCGGCTCGTGCAAGTCCTTCATCAGCCCGGTGCCGCACCTGAGCTTCGTCCAGGGCGACAAAGGCGTGTCGTTCCTCAAGGAACGCTTCAACG TGCTGCACAAGCACCACGCCTTCGCCGACATGGAATACACCGAAGACAAGGCCAAGATGGCCGAGTGGATGCCGCTGATGATGCCGGGCCGTTCGCCGGA CGAAGTCCTGGCTGCGACCCGCGTGATGAACGGCACCGACGTCAACTTCGGCGCCCTGACCAATCAGTTGCTCAAGCACCTGACCAGCGCACCGGACACT CAGGTCAAATACTGCAAGCGCGTGACCGGCCTCAAGCGTAACGGCGCCGGCTGGACCGTCAGCATCAAGGACGTCAACAGCGGCAACAGCCGTGAAGTCG ATGCCAAATTCGTCTTCCTCGGCGCCGGTGGCGCGGCCCTGCCGCTGCTGCAGGCTTCGGGCATCGAGGAAAGCAAAGGTTTCGGCGGCTTCCCGATCAG TGGCCAGTGGCTGCGTTGCGATAACCCGGAAGTGGTCAAGCACCACCAGGCCAAGGTTTACAGCCAGGCCGCGGTGGGTTCGCCACCCATGTCGGTGCCG CACCTGGATACCCGCGTGGTCGACGGCAAGAAATCCCTGCTGTTCGGACCATACGCCGGTTTCACCACCAAGTTCCTCAAGCACGGTTCCTTCATGGACC TGCCGCTGTCGGTTCGCGCCGGCAACATCGGGCCGATGCTGGCGGTGGCGAAGAACAACATGGACCTGACCAAATATCTGGTCAGCGAAGTGATGCAATC GATGGAGCAGCGTCTGGACTCCCTGCGCCGCTTCTACCCGGAGGCGAAAGCCGAAGACTGGCGCCTGGAAGTGGCCGGCCAACGGGTGCAGATCATCAAG AAAGACCCGAAAAAGGGCGGCATCCTGCAATTCGGTACCGAGCTGGTCGCAGCGAAAGACGGCTCCCTCGCCGCCCTGCTCGGCGCTTCTCCAGGCGCTT CGGTGACCGTTTCGATCATGCTGGAACTGATCGAGAAATGCTTCCCGGCCAAGGCCAAGGGTGAGTGGGCAGCCAAACTGGCGGAGATCTTCCCGGCCCG TGAAAAGGTTCTGGAAACCGATGCTGCGCTGTATCGCAAGATCAACACGCAGAACAACATCGCCCTGGAACTGGTTGAAGAAAGCAGCGAGACCCCAAGC TTCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTTGCGGTATGAAAAACGCCCCGTACTCAGTGAGTGCGGGGCGTTTTTTATGGCCCTGAAAAGCAAAAGATCGCAGCCTGCGGCAGCTCCTACAGGGTA AACACAAATCCAGTGTAGGAGCTGCCGCAGGCTGCGATCTTTTGATCTTGTCTTTTGATCTTAACCGCGCGCCTTGTCGATCAGCTCAATGTACTCGGCC GCGTTACGCTGATCCTTGATCAGATCAACAAACGTCTGGCCCTGCTCATCCTTGCCATCCACGTCGTAACCGGCAGCCACGAAGAACGTCAGAAAGCGCT CGAAATCGTCGATGCGCAAACCACGATAAGCCTTGATCAGTTTGTGCAGCGACGGCGAAGTGGCGTCGACCGGTTCAAAATCGAGGAACAGCTTGATCTG CTCATCGCCGATCTCGTCACCAATCACCTGTTTCTTATCTTTACGCATTGCCGACTCCAGCTCGCAGACATTACACGGGGCGGGCAGTTTACCCCTGCCC
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| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPTIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSVDIKKAVHINTQFEVSKQFWSYLTKK GTFGSCKSFISPVPHLSFVQGDKGVSFLKERFNVLHKHHAFADMEYTEDKAKMAEWMPLMMPGRSPDEVLAATRVMNGTDVNFGALTNQLLKHLTSAPDT QVKYCKRVTGLKRNGAGWTVSIKDVNSGNSREVDAKFVFLGAGGAALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLDSLRRFYPEAKAEDWRLEVAGQRVQIIK KDPKKGGILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPAKAKGEWAAKLAEIFPAREKVLETDAALYRKINTQNNIALELVEESSETPS FA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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