Strain | Pseudomonas fluorescens strain AU5633 Contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAATACAACGAAGAAGGTGGCCTGCCCGCTCGCCATGCGCGCTACGCCGCCAACTGTCAGGCACTGATGGACGAGATGGGCAAACTCGGCCTGCGCAGC TTCCTGCCGGCGGCGATCCAGGCGCCGATCATCGCCACCTTCCATGCCCCGCGAGACCCGCGCTACCAGTTCAAGGACTTCTACGAACGGGTCAAGGCCA AGGGTTACATTCTCTACCCCGGCAAACTGACCCAAGTGGAAACCTTCCGCGTCGGCTGCATCGGCCACGTCAGCCCGGATGAAATGCGCCAGGCCGTGGC GGCGGTGGGTGAAGTGCTGCGCGAAATGGAAGTGCTGGAGATCTGAATCACCACGATACCTGTGGGAGCGGGCTTGCCCGCGATAGCGGTCTGACCATCA GCATAGATGTCGACTGAAAGGGCCCCATCGCGGGCAAGCCCGCTCCCACAGGATCGCCGAACCTTTTGAATTGCATTGCCAACACAGGATTCTTATTGCC
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DNA Sequence for Gene |
>AA066_RS04475
ATGAACTACGTAAACCCAAGCAAGCTGCAAGCCGCGATCCTCGACTGGGCCGGCACCGTGGTCGATTTCGGCTCGTTCGCGCCAACGCAGATCTTCGTCG AAGCCTTCGCCGAGTTCGACGTTCAGGTGTCCATCGACGAAGCCCGTGGCCCGATGGGCATGGGCAAATGGGACCACATTCGCACCCTGTGCGATCAACC GCAGGTCGCCGAGCGCTATCGCAAAGCATTCGGCCGCACCCCGACCGACGATGACGTGACCGCCATCTACAACCGCTTCATGCCGCTGCAGATCGAAAAG ATCGCCGAACACTCGGCGCTGATTCCCGGCGCACTGGAAACTATCGCCCACCTGCGTCAGCAAGGGATCAAGATCGGTTCCTGCTCCGGTTACCCGAAAC AGGTGATGGACAAGGTCGTGGCGCTGGCCGCCACCAACGGCTACGTTGCCGACCACGTGGTCGCCACCGACGAAGTGCCAAATGGCCGTCCATGGCCGGC TCAGGCGCTGGCCAACGTGATTGCGCTGGGTATCGATGACGTCGCGGCCTGCGTGAAGATCGACGACACCGTGCCGGGCATTCTCGAAGGTCGTCGCGCC GGGATGTGGACTGTCGCGCTGATCTGTTCGGGCAACGCGCTGGGCCTGGACTACGCCGGCTACCGTGCGCTGGGCAGCGACGAACTGGCCAGCGAACGCA AACGCATCCACGCATTGTTCGCCGGTTCCCGTCCGCACTACATGATCGACACCATCAGCGACCTGCCGGAAGTGATTGCCGACATCAACAAGCGCCTGGC CAACGGCGAGATGCCGCAATCGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTACGTCTTTTGTCAAAACAACAAAAAACGCCAGGGTCTTCGCGACACTGGCGTTTTTTTTATGGCTGCGGCCTTGAGTCAGCGCTTTGAAACTCCGATC AGCCTCAGGCAAATCCGCCAAAGCGGATTACAGTTAAAGCATGCCGTCGCACAAGAACGGCACGTGGCGACTCTGATCTGTGAGGAAACACCGTATGCCG TGGACAAGTTCCGAATCGCGCTACAGCACCGTGTCCGTGCTGCTGCACTGGCTGATGCTGATCCTGTTGATCCTGGTCTATGCCAGCATGGAATTGCGCG GGATCTTTCCCAAAGGCAGTGGCGGCCGCGCGCTGATTCGCGAAGTGCATTACATGCTCGGCCTGACCGTGTTCGTGCTGGTGTGGTTTCGCCTAGTCGC CCGCAGCATCGGCCCGGCACCAAAAATCTTCCCGGCCTCGCCGCAGTGGCAAACCCTGCTGGCGCGGGTGATGCACTGGCTGTTGTACCTGTTCATGATC
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Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MNYVNPSKLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFDVQVSIDEARGPMGMGKWDHIRTLCDQPQVAERYRKAFGRTPTDDDVTAIYNRFMPLQIEK IAEHSALIPGALETIAHLRQQGIKIGSCSGYPKQVMDKVVALAATNGYVADHVVATDEVPNGRPWPAQALANVIALGIDDVAACVKIDDTVPGILEGRRA GMWTVALICSGNALGLDYAGYRALGSDELASERKRIHALFAGSRPHYMIDTISDLPEVIADINKRLANGEMPQSS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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