Pseudomonas fluorescens AU5633, AA066_RS04035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAGCGCCGCCTGACTGCCCTGAGCGTCGAGCACCGAATAGAAGTCCTTCTGCTGCCACGCACGTTTGCCGAAAGCGTCGTAGAACAGTCGCGTGGTCG GCGCAGCCTGAGTGCGCTCGCCGTCGTAGACCGGCATCTTGCTCGCGCCACGGCCAGCGCCTTCACCGCTGCCCAGGTTGAGCTGGCACGGCGAGTCGTA GCACGCATGGCAGGCCACGCATTTCTCGGTGAAGATCGGCTGGATGTCTCGGGTGTACGAAATAGCAGCAGAGATCGCGGGTTCCTGCGCCACGGCGCCC CAGCTTAAAAACAGCAAGAAAATGCTGATGACGCGGTACGACATGCCCTTGATCCCGATCCAGAAAAAAACGTCCGCGATTCTACAGTATGACGCCCGTA CCAACATGAGCGATATTCATGCAAAAGCGGCACATGCTCCAAAAGCGCACAGGTTTGCTATGATCCCGGCCCTTCGTCATGGTCTTTTCGAGTAGTCCCA
DNA Sequence for Gene
>AA066_RS04035
ATGTCCGATCGCAGCGTCCGCCTTCAAGCTCTCAAGCAAGCCCTCAAAGAGCGCATCCTGATACTCGATGGCGGCATGGGCACGATGATCCAGAGCTACA AGCTCGAGGAGCAGGATTATCGCGGCAAACGCTTCGCCGACTGGCCGAGCGACGTCAAGGGCAACAACGACCTGTTGGTGATCACCCGTCCGGACGTGAT CGGCGGCATCGAAAAGGCTTATCTGGATGCCGGCGCCGACATTCTGGAAACCAACACTTTCAACGCCACGCGCATTTCCATGGCTGACTACGGCATGGAA GAACTGGCGTACGAATTAAACGTAGAAGGCGCGCGTCTGGCGCGCAAGGTGGCCGACGCCAAGACCGCCGAGAACCCGGACAAGCCACGCTTCGTTGCTG GCGTACTCGGCCCGACCAGCCGTACCTGCTCGCTGTCGCCTGACGTGAACAACCCAGGCTACCGCAACGTCACCTTCGATGAATTGGTGGAAAACTACAC CGAAGCCACCAAAGGCCTGATCGAGGGCGGCGTCGACCTGATCCTGATCGAAACCATCTTCGACACGCTCAACGCCAAAGCCGCGATCTTCGCCGTACAA GGCGTCTTCGAAGAACTGCACATTGAACTGCCGATCATGATTTCCGGGACCATCACCGATGCGTCCGGCCGCACCCTCTCGGGCCAGACCACCGAAGCGT TCTGGAACTCGGTGGCCCACGCCAAGCCAATCTCGGTCGGCCTCAACTGCGCCCTCGGCGCCAGCGAACTGCGTCCGTATCTGGAAGAGCTGTCGAACAA GGCCAGCACTCACGTGTCGGCGCACCCGAACGCCGGTTTGCCGAACGAATTCGGCGAGTACGACGAATTGCCGGTGGACACCGCCAAGGTCATCGAAGAA TTCGCCCAAAGCGGTTTCCTCAACATCGTCGGCGGTTGCTGCGGCACCACTCCGGGCCACATCGAAGCCATCGCCAAAGCCGTCGCCGGTTACGCGCCGC GGCAGATTCCGGACATCCCCAAGGCCTGCCGCCTGTCGGGTCTGGAGCCGTTCACCATCGATCGCAGCTCGCTGTTCGTCAACGTTGGCGAGCGCACCAA CATCACCGGCTCCGCGAAGTTCGCCCGTCTGATCCGTGAAGACAACTACACCGAAGCCCTGGAAGTCGCCCTGCAGCAGGTCGAGGCCGGCGCCCAGGTG ATCGACATCAACATGGACGAAGGCATGCTCGATTCGAAGAAGGCCATGGTGACCTTCCTCAATCTGATCGCCGGCGAGCCGGACATCTCCCGCGTGCCGA TCATGATCGACTCGTCGAAATGGGAAGTCATCGAAGCCGGTCTGAAGTGCATTCAAGGCAAGGGCATCGTCAACTCGATCAGCATGAAAGAAGGCGTCGA GCAGTTCATCCATCACGCCAAGCTGTGCAAACGCTACGGCGCGGCAGTGGTGGTCATGGCCTTCGACGAAGCCGGCCAGGCCGACACCGAGGCGCGCAAG AAAGAGATCTGCAAACGCTCCTACGACATTCTGGTCAACGAAGTCGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATCTTCGCCGTGGCCACCG GCATCGAAGAACACAACAATTACGCTGTGGACTTCATCAATGCCTGTGCCTACATCCGTGACGAACTGCCGTATGCGCTGAGCTCCGGTGGCGTGTCCAA CGTGTCGTTCTCGTTCCGCGGCAACAACCCGGTGCGTGAGGCGATCCACTCGGTGTTTCTGCTGTATGCGATCCGCGCCGGCCTGACCATGGGTATCGTC AACGCCGGTCAGCTGGAGATCTACGACCAGATCCCGCAGGAACTGCGCGACGCCGTCGAAGACGTGATCCTCAACCGCACGCCGGAAGGCACCGACGCCC TTCTCGCCATCGCCGACAAGTACAAGGGCGACGGCAGCGTCAAGGAAGCCGAGACCGAAGAGTGGCGCAGCTGGGACGTCAACAAGCGTCTGGAGCATGC GCTGGTCAAGGGCATCACCACCCACATCGTCGAAGACACCGAAGAGTCGCGCCAGTCATTTGCCCGCCCGATCGAAGTCATCGAAGGCCCGCTGATGTCC GGCATGAACATCGTTGGCGACCTGTTCGGCGCCGGCAAAATGTTCCTGCCGCAGGTGGTCAAATCCGCCCGCGTGATGAAGCAAGCCGTGGCGCATTTGA TCCCGTTCATCGAACTGGAAAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTGATGGCCACGGTAAAAGGCGACGTGCACGACATCGGCAAGAACAT CGTCGGCGTGGTGCTGGGTTGCAACGGCTACGACATCGTCGACCTCGGCGTGATGGTCCCGGCGGAGAAAATCCTTCAGGTCGCCAAGGAAGAAAAGTGC GACATCATTGGCTTGTCCGGCCTGATCACCCCGTCGCTGGACGAGATGGTCCACGTTGCCCGGGAAATGCAGCGTCAGGATTTCCACCTGCCGCTGATGA TCGGTGGCGCGACCACCTCCAAGGCGCACACCGCCGTGAAGATCGAGCCGAAGTACAGCAACGATGCGGTGGTCTACGTGACCGACGCCTCGCGTGCGGT CGGCGTCGCGACGCAGTTGCTGTCCAAGGAACTCAAGGCCGGATTCGTCGAGAAGACCCGCGCCGATTACGTCGACGTGCGTGAGCGCACCGCCAACCGC AGCGCCCGTACCGAGCGCCTGAGCTACGCGGCGGCGATCGCCAAGAAGCCGCAGTTCGACTGGGCCAGCTACACGCCGGTCAAACCGACCTTCACCGGCA CCCGCGTGCTGGATAACATCGACCTCAACGTGCTGGCCGAATACATCGACTGGACGCCGTTCTTCATCTCCTGGGACCTGGCCGGCAAGTTTCCGCGCAT CCTCGAAGACGAAGTGGTCGGTGAAGCCGCCACCGCGCTGTACAAGGATGCGCGTGAAATGCTCACCAAGCTGATCGACGAGAAGCTGATCAGCGCCCGT GCGGTGTTCGGTTTCTGGCCGGCCAATCAGGTACACGACGACGATATCGAGCTGTACGGCGATGACGGCAAGCCCATGGCGCGCCTGCATCATCTGCGTC AGCAGATCATCAAGACCGACGGCAAGCCGAACTTCTCGCTGGCCGACTTCGTCGCGCCGAAAGACAGCGAAGTGACCGATTACGTCGGGGGGTTCATCAC CACCGCCGGCATCGGCGCCGAAGAAGTGGCCAAGGCTTATCAGGACGCTGGCGACGACTACAACTCGATCATGGTCAAAGCCCTCGCCGACCGTCTGGCG GAAGCTTGCGCCGAATGGCTGCACCAGCAAGTGCGTAAAGAACACTGGGGTTATGCCAAGGACGAAGTGCTGGACAACGAAGCGCTGATCAAAGAGCAGT ACTCCGGTATCCGTCCGGCACCGGGTTACCCGGCCTGCCCGGATCACACCGAGAAGGCCACGCTGTTCACCCTGCTCGATCCTGAGGCCAGCGAAATGCG CGCGGGCCGCAGCGGCGTGTTCCTCACCGAACACTATGCGATGTTCCCCGCAGCCGCGGTCAGCGGCTGGTACTTCGCGCACCCGCAGGCGCAATACTTT GCCGTGGGCAAGGTCGACAAGGATCAGGTGCAGAGCTACACCTCGCGCAAAGGTCAGGAACTGAGCGTGACCGAGCGCTGGCTGGCGCCGAACCTCGGTT ACGACGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCGACGGTCACTCCACGGATCAGCCGGGGAGTGACCGTTCACCAGGTTTTACGCGCCTGACGATTGCCCGGATGAGCCGGGCATTGGTGCCTTGTCGG CAGACAAACCGATCCATTCAATCGCCTGTCGCGTCAATTCGATAAGCCTGGCATTGCGCGCCGCTGCCTGATCGAACAACCGGCTCAGATAAAGCGGGTC GTCAACACTCAGACCGTCGTCCTCGCCCTCCTCCATCAACTGCCCTTCATCCATTTGTCTGAACGCTTCGGGCTGCTGCTCCTTGAGGTAATCCAGCCAG TAATCGCGCTGGATCAGATCCTCCAGAAACCGGTCGGAGTGCTCCGCGCTAACCACCTCGGCCCGCGCATCGAACAACTGCTGAGGCGTTACACCGGAGG CAAATTTCATGTTTTTCGGCTGCCCGGGCAATTCCAGTCCATCCTCCCAGCCACCGGTCAGACCGATCCGGTAGCCGAGGCGGACTTCGGCTTCGTCAAA
Amino Acid Sequence
>methionine synthase
MSDRSVRLQALKQALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVITRPDVIGGIEKAYLDAGADILETNTFNATRISMADYGME ELAYELNVEGARLARKVADAKTAENPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGVDLILIETIFDTLNAKAAIFAVQ GVFEELHIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGASELRPYLEELSNKASTHVSAHPNAGLPNEFGEYDELPVDTAKVIEE FAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQV IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAFDEAGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDELPYALSSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRAGLTMGIV NAGQLEIYDQIPQELRDAVEDVILNRTPEGTDALLAIADKYKGDGSVKEAETEEWRSWDVNKRLEHALVKGITTHIVEDTEESRQSFARPIEVIEGPLMS GMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAKEEKC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVEKTRADYVDVRERTANR SARTERLSYAAAIAKKPQFDWASYTPVKPTFTGTRVLDNIDLNVLAEYIDWTPFFISWDLAGKFPRILEDEVVGEAATALYKDAREMLTKLIDEKLISAR AVFGFWPANQVHDDDIELYGDDGKPMARLHHLRQQIIKTDGKPNFSLADFVAPKDSEVTDYVGGFITTAGIGAEEVAKAYQDAGDDYNSIMVKALADRLA EACAEWLHQQVRKEHWGYAKDEVLDNEALIKEQYSGIRPAPGYPACPDHTEKATLFTLLDPEASEMRAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF AVGKVDKDQVQSYTSRKGQELSVTERWLAPNLGYDE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site