Strain | Pseudomonas fluorescens strain AU5633 Contig_14, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATTTGCAAGGCTTTAAAGTCGGCGTTCCGATTGTTTGATGTCAAAGAGATGGCACAAAAGTTGAAGCCTATGTTTTGAGCGAATCTCAGCAGGATCGGAT AAGCAGTCTCTATTTCTCTCGCGAAAGTCAGTTGCTTTAATTGCGACTCCTTCCACATTTCCATCACAAACGCTCCGTGAAATCGTTTTTACGCGCTGGG CTTTTTGGATCCAATGAATCCATCACGCAACCGAGTTTAGGACATGTCCTACAGTTGGCGTTGAACTTTTTTGCTCTTTGCAGAGAAGTTTGATTGCAAG AATGTTATTAGCCCGGAGTAGAGCGTTGTATTCAATGTGTCATTCAATTTCAGATTGAAATCTGAAAATTTCTCCATTGGTGTATCTGAGTTTGTGTCTC ATTGGGTTCGCTAGCTAAATGAAAAGACATTACAAAAACAGTGGTGTTTACAGTGTCAGTTTGCGCGAAACTGTCTGGGTTCTTTACAGTGGAGTGGCCC
|
|
DNA Sequence for Gene |
>AA066_RS21755
ATGACTGTCAGTGCAGAAAAGTTTACTGCCCAGACCTTGCTCGACGTGCAGCCCTTGACCCCCAGCCTGTTCACGTTGCGCACTACGCGCGATACAGGTT TCAGGTTCCGCGCAGGACAATTCGCGCGCCTGGGCGTGACCAAGGCGGATGGCAGCACGGTGTGGCGTGCCTACTCGATGGTTTCTTCACCCTTCGACGA GTTTCTCGAGTTCTTCTCTATCGTGGTGCCGGGTGGCGAATTCACCAGCGAACTGAGCCGGTTGCAGGTCGGCGATACCGTGCTGGTGGAGCGCCAGGCC TTTGGTTACCTGACGCTGGATCGTTTTGTCGACGGCCGGGATCTGTGGTTGCTATCCACAGGGACCGGCGTGGCACCGTTTCTGTCGATCCTGCAGGACT TCGAAGTGTGGCAGCGTTTCGAGCGAATTATTCTGGTGTACAGCGTGCGCGAGGCAAGGGAACTGGCCTATCAATCATTGATCGCTGAGCTTTCCACACG TGATTACTTGGCAGAGCATGCCCATAAATTACGGTTCATCCCCACGGTTACCCGCGGACAAGGGCCTGGCGCCTTGCACGGTCGCATCACCACGTTGATC GAAAGCGGCGAACTGGAACGTGAAGCCGGCGTGAAACTGACCCCTGAGCACTCGCGTGTCATGCTGTGCGGCAATCCGCAGATGATCGATGACACCCGGG CGTTGCTGAAGAAACGTCACATGAGCCTGAGCCTGACGCGGCGGCCCGGTCAGGTCGCGGTGGAAAATTACTGGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAAAACGGCGCCATCAGGCGCCGTTTTCATTCATGAAACCGTCAAGGCCGATTGTTCTGCGCCTTGAGCAGATCGCGGATCTCGCCGAGCAACTCTTCTT CCTTGGTTGGAACCGGCGGCAGGGAAGGGGCTACGGCTTCTTCGCGTTTCAGGCGGTTGATGGCTTTGACACCCATGAAAATCGCAAAGGCGACGATCAC GAAGTCCAGAATGCTCTGAATGAATTTACCGTAAGCCAGTACCACGGCAGGGGCGTTGCCCTCGGCGGCTTTCAACGTGATGGCCAGATCACTGAAGTCC ACCCCACCGATCAACAGGCCGATTGGCGGCATGATCACGTCGCCGACAAACGATGAAACGATTTTGCCGAAGGCTGCACCGATGATGATACCGACGGCCA TGTCGACCACATTGCCTTTGACCGCGAAGGCCTTGAACTCACTTAGCACGCCCATAGGTTATTTCCTTGTTACAGATGAGTTTGGTGTACGCAGTGTAAA
|
|
Amino Acid Sequence |
>ferredoxin-NADP reductase
MTVSAEKFTAQTLLDVQPLTPSLFTLRTTRDTGFRFRAGQFARLGVTKADGSTVWRAYSMVSSPFDEFLEFFSIVVPGGEFTSELSRLQVGDTVLVERQA FGYLTLDRFVDGRDLWLLSTGTGVAPFLSILQDFEVWQRFERIILVYSVREARELAYQSLIAELSTRDYLAEHAHKLRFIPTVTRGQGPGALHGRITTLI ESGELEREAGVKLTPEHSRVMLCGNPQMIDDTRALLKKRHMSLSLTRRPGQVAVENYW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|