Pseudomonas fluorescens AU13852, AA097_RS16400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_45, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGGGCCAGCGCTTCCTGGAGATCTGGTCCGGGCTGCCGGTGCTCTACCTGCTGATCATCCTCGCCAGCTTCGTGCAGCCCAACTTCTGGTGGCTGCTG GGGATCATGCTGCTGTTCTCCTGGATGAGCCTGGTGGACGTGGTGCGGGCCGAGTTCCTGCGCGGGCGCAACCTGGAATACGTGCGCGCGGCCCGGGCCC TGGGCATGCAGAACGGCGCCATCATGTTCCGCCATATCCTGCCCAACGCCATGGTCTCCACCATGACCTTCATGCCCTTTATCCTCACCGGCGCCATCGG CACCCTCACCGCCCTGGACTTCCTCGGTTTCGGCCTGCCGCCGGGGGCGCCATCCCTCGGCGAGCTGGTGGCCCAGGGCAAGTCCAACCTGCAGGCGCCC TGGCTGGGCATCAGCGCCTTCGCCGTGCTGGCGATCATGCTCAGCCTGCTGGTGTTCATCGGCGAATCCGCCCGCGATGCCTTCGACCCGAGGAAATGAC
DNA Sequence for Gene
>AA097_RS16400
ATGACCCAGGACAACCTGATCGAAGTCCGCGACCTGGCGGTGGAGTTCGTCACCGGCGAGCACCGCCAGCGGGTGGTGCAAGGCGTCAGCTTCGACATCA AGCGCGGCGAGACCCTGGCCCTGGTGGGCGAAAGCGGCTCGGGCAAATCGGTCACCGCCCACTCCATCCTGCGGCTGCTGCCCTACCCTCTGGCGCACCA CCCCAGCGGCACCATCCAGTATGCCGGGCACGACCTGCTGACCCTGAAAGAGAAGACCATCCGCCATATCCGCGGCAACCGCATCGCGATGATCTTCCAG GAACCCATGACCTCGCTGAACCCGCTGCACTCCATCGGAAAGCAGATCAACGAAGTGCTGGGCATCCACAAGGGCCTGACCGGCAAGGTCGCCACCCGGC GCACCCTGGAGCTGCTGGAACTGGTGGGCATCCCCGAACCGCACAAGCGCCTCAAGGCCCTGCCCCACGAGCTGTCGGGCGGCCAGCGGCAACGGGTGAT GATCGCCATGGCCCTGGCCAACGAGCCGGAGCTGCTGATCGCCGACGAGCCCACCACGGCCCTGGACGTCACCGTGCAGTTGAAAATCCTCGAACTGCTC AAGGAGCTGCAGGCGCGCCTGGGCATGGCCCTGCTGCTGATCAGCCACGACCTGAACCTGGTGCGGCGCATTGCCCACCGGGTCTGTGTCATGCAGAAGG GCTGCATCGTTGAACAGGCATCCTGCGAAGATCTGTTCCGCGCGCCGCAGCATCCCTACACCCGGGAACTGCTGGCCGCAGAGCCCAGCGGCCTGCCGGC GGCCAACGAGATTGGCCCGCCGCTGCTGGAGGTTAACAACCTCAAGGTCTGGTTCCCGATCAAGAAAGGCCTGCTGCGCAGCACCGTGGATCACGTCAAG GCAGTGGACGGCATCCACTTCAGCCTGCCCCAGGGCCAGACCCTGGGCATCGTTGGTGAAAGCGGCTCGGGCAAGTCGACCCTGGGCCTGGCGATCCTGC GCCTGATTGCCAGCCAGGGCGGCATTCGCTTCGAGGGCCAGCAACTGGACAGCCTGACCCAGCAACAGGTTCGGCCGCTGCGGCGGGAAATGCAGGTGGT GTTCCAGGACCCTTTCGGCAGCCTCAGCCCGCGCATGAGCGTGAGCCAGATCGTCGGCGAGGGCCTGCGCATCCACAAGATAGGCAGTGAACAGGAGCAG GAACAGGCCATCATCGCAGCCCTCAAGGAGGTCGGCCTGGACCCGGACACGCGGCACCGCTACCCCCATGAGTTCTCCGGCGGGCAGCGCCAGCGCATCG CCATCGCCCGGGCCCTGGTGCTCAAGCCGCGGCTGATCCTGCTGGACGAACCGACCTCGGCCCTGGACCGCACGGTACAGCGCCAGGTGGTGGAGCTGCT GCGCAACCTGCAACGCAAGTACAACCTGACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAAGGCCCTGAGCCACCAGTTGATGGTGATCAAGCAC GGCCAGGTGGTGGAACAGGGTGACGCGCACAGTATCTTCGCCGTCCCACAACATCCCTACACACGGCAATTGCTGGAAGCCGCCTTCCTGGCTCCGGCAA GCGCCGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGCAACAGGAGTAGCAATCTATGGGTTTTCTCGCTGGGAAGCGTGTCCTGATCGTCGGTGTCGCCAGCAAGCTGTCGATCGCCTCCGGCATTGCCGCC GCCATGCACCGTGAAGGTGCCGAGCTGGCCTTCACCTATCAGAATGAAAAACTCAAGGGTCGGGTCGAGGAGTTCGCCGCCGGCTGGGGCTCCAGCGCCG AGCTGTGCTTCCCTTGCGATGTGGCCAGTGACGAGCAGATCGCCCAGGTCTTCACCGCACTGGGCAAGAAATGGGACGGCCTGGACTGCATCGTCCACTC CGTGGGCTTCGCCCCTGGCGACCAGCTCGAAGGCGACTTCACCGATGCCACCACCCGCGAGGGCTTTCGCATCGCCCACGACATCAGCGCCTACAGCTTC GTGGCCCTGGCCAAGGCCGGTCGGGAAATGATGAAGGGCCGCAACGGCAGCCTGCTGACCCTGTCCTACCTGGGCGCCGAACGCACCATGCCCAACTACA
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MTQDNLIEVRDLAVEFVTGEHRQRVVQGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLAHHPSGTIQYAGHDLLTLKEKTIRHIRGNRIAMIFQ EPMTSLNPLHSIGKQINEVLGIHKGLTGKVATRRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL KELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQASCEDLFRAPQHPYTRELLAAEPSGLPAANEIGPPLLEVNNLKVWFPIKKGLLRSTVDHVK AVDGIHFSLPQGQTLGIVGESGSGKSTLGLAILRLIASQGGIRFEGQQLDSLTQQQVRPLRREMQVVFQDPFGSLSPRMSVSQIVGEGLRIHKIGSEQEQ EQAIIAALKEVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRNLQRKYNLTYLFISHDLAVVKALSHQLMVIKH GQVVEQGDAHSIFAVPQHPYTRQLLEAAFLAPASAE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site