Pseudomonas fluorescens AU13852, AA097_RS06690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_42, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATAGACTCGGGCTTTTCGCAAAAGTTCTCCCCCTCCAAGCAAGTTTCCTGCGGGCTCTGATCCGGCACGCACGAAAAACGCAGCACGGGCAAGGCCGGC TGCGCGAATAATCCTGTCGTCGAATTCTGTCACAAGGGACACACTGTAAACCTTGGATATAACCGACGCTGTCCCTTCTTTCAGGCAACCTTCTATTGAG TTTGGGGCCTTGGCAAAAGTTCCCAATCTTTATAGCTGCGCCGGACGAAGATTGTGTAACGGTGGCAAGAAAAACCGCCCTATGTCGCCGATCAGCCGCT CCAGAGGCTGGAATGCTCCGAATATCGGACTGACCGAGAGCAACGCTTTTGCTCGGTGAAGTCGCACAATGCCATGAAGGCGCGACTATTGTGCCGATCC CCCCCTCTATATACTAGTGGGCTGTGTGGCTGCTTTGACTTGCCGATTCAGGCGTCTTGCGCCAACCCCTTCCCGGGTCGCTTTGAGCGGAATCCTTCAA
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| DNA Sequence for Gene |
>AA097_RS06690
ATGAGCCAACAGTTTCAACACGATGTTCTGGTGATTGGCAGCGGTGCCGCCGGCTTGAGCCTGGCCCTGACCCTGCCCAGCCACCTGCGTATTGCCGTCT TGAGCAAAGGCGACCTCGCCAACGGCTCGACATTCAGGGCCCAGGGCGGCGTCGCGGCCGTGCTGGATGATACCGATACCGTAGAATCCCACGTCGATGA CACCCTCAATGCCGGCGGCGGCCTGTGCCACGAGGATGCGGTGCGCTTTACCGTGGAACACAGCCGCGAGGCCATCCAGTGGCTGATCGACCAGGGCGTG CCCTTTACCCGCGACGAAGACTCCAGCAGCGACGACAGTGGCTTCGAATTCCACCTGACCCGCGAGGGCGGCCACAGCCACCGGCGGATCATCCACGCGG CGGATGCCACCGGTGCGGCCATCTTCAAGACCCTGCTGGCCCAGGCTCGGCAACACCCCAATATCGAATTACTGGAACAACGGGTCGCCGTCGACCTGAT CACCGAAAAACGCCTGGGGCTGGAAGGCGACCGCTGCCTGGGAGCCTACGTGCTCAACCGCAGCACCGGCCAGGTCGACACCTTTGGCGCACGCTTCGTG ATCCTCGCCTCCGGCGGCGCAGCCAAGGTCTACCTCTATACCAGCAACCCCGACAGTGCCTGCGGCGACGGTATCGCCATGGCCTGGCGCTCGGGCTGCC GGGTGGCCAACCTGGAATTCAACCAGTTCCACCCCACCTGCCTGTATCACCCACTGGCCAAGAGCTTCCTGATTACCGAAGCCCTGCGTGGCGAAGGCGC CCACCTCAAGCTGCCCAACGGCGAACGCTTCATGCCGCGCTTCGACCCGCGGGCCGAGCTGGCACCACGGGACATCGTGGCCCGGGCCATCGACCATGAA ATGAAGCGCCTGGGCATCGACTGTGTGTACCTGGACATCAGCCACAAGCCGGAAGCCTTCATCAAGAGCCACTTCCCCACCGTTTACGAACGTTGCCTGG AGTTTTCCATCGATATCACCCGGCAGCCGATCCCGGTGGTGCCGGCCGCGCACTACACCTGCGGAGGAGTGATGGTGGACCAACAGGGCCGCACCGACGT GCCGGGCCTGTACGCCATTGGCGAAACCAGCTTCACCGGCCTGCACGGCGCCAACCGGATGGCCAGCAACTCGCTGCTGGAGTGCTTCGTCTACGCCCGT TCGGCGGCGGCCGATATTCTTCGGCAACTGCCCCAGGTGTCGATCCCCATCGCCCTGCCCGCCTGGGATGCCAGCCAGGTCACCGATTCCGATGAAGACG TGATCATTGCGCACAACTGGGACGAGTTGCGGCGGTTCATGTGGGACTACGTGGGCATAGTGCGCACCAACAAGCGCCTGCAGCGGGCCCAGCACCGGGT GCGCCTGCTGCTGGACGAGATCGACGAGTTCTACAGCAACTACAAGGTCAGCCGTGACCTGATCGAGCTGCGCAACCTGGCCCAGGTGGCCGAGCTGATG ATTCTCTCGGCCATGGAGCGCAAGGAGAGCCGCGGCCTGCACTACACCCTGGACTACCCGCAGATGCTGCCCGAGGCCCGGGACACTATTCTGGTGCCGC CCACCTACGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTTGAGCCGCAGCCGCAGGCGCCGATGTTGGTCGGCGGCCTGCGCGTCCCGCGGCACACAGACAGAGCGCACCCAGCGCTCCCCCCGCAACCGAAAACG CAGCACCACGATCAATGGCAGCGCCAGGCTGTCGGGGCGCAACTGCACGGCCTGCCACCCCTCGGATCGACTCCATAGCTGCCAGCCTTCGGGCGAATGG CGCAACCCGGTGAAGGCCCGTGGATGGCTCAAGAGAATCTGCCGCGGCAACACCCAGCCGGCGTGCAGCAGGCACAACCCTAGCCCCACAAGCCTGGCGA CAGACGGAAGATCCAGCAGGAAAAACGCGCCCAGGGCGAACGCCTGGGCCAGCAGGTAGGCCGCCAGCAGTTGCCGTGAGGCACGCCAGCGGCATTCGAA CAACCTACTTGGGTTGGACACGGTCCAGAATCATGCGGACCATGCGCTGCAGCTCGGGGTCCTCGGACTCGCTGCGCTCCATGAACCAGCCAAACATGTC
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| Amino Acid Sequence |
>L-aspartate oxidase
MSQQFQHDVLVIGSGAAGLSLALTLPSHLRIAVLSKGDLANGSTFRAQGGVAAVLDDTDTVESHVDDTLNAGGGLCHEDAVRFTVEHSREAIQWLIDQGV PFTRDEDSSSDDSGFEFHLTREGGHSHRRIIHAADATGAAIFKTLLAQARQHPNIELLEQRVAVDLITEKRLGLEGDRCLGAYVLNRSTGQVDTFGARFV ILASGGAAKVYLYTSNPDSACGDGIAMAWRSGCRVANLEFNQFHPTCLYHPLAKSFLITEALRGEGAHLKLPNGERFMPRFDPRAELAPRDIVARAIDHE MKRLGIDCVYLDISHKPEAFIKSHFPTVYERCLEFSIDITRQPIPVVPAAHYTCGGVMVDQQGRTDVPGLYAIGETSFTGLHGANRMASNSLLECFVYAR SAAADILRQLPQVSIPIALPAWDASQVTDSDEDVIIAHNWDELRRFMWDYVGIVRTNKRLQRAQHRVRLLLDEIDEFYSNYKVSRDLIELRNLAQVAELM ILSAMERKESRGLHYTLDYPQMLPEARDTILVPPTYAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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