Pseudomonas fluorescens AU13852, AA097_RS05910

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_42, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGGTAGCTGTTGTTCAGGTCCAACTCGATCTGCACCTGGGGATAGTGCCGGGAGAACTCCAGCAGCAGGCCGTCGAAAAAGGTTTCGCCCAGGGAGAC CGGAACGGTGAGGCGCACCGGCCCGGCCATATCGTCCTTGAGCCGCGCCAGGGCCTGGTGTGCCCGCTCGACCTGAGCCACCAGGGCCTGGGCCTGGGGC AGCAACGCCGCGCCGGCGGCCGTGAGGTCCAGGCGCCGGGTGGTGCGTTGCAGCAGTACCACGGCGTAGCGGGCTTCCAGGGCGCTGATGCGTTTAGAGA GCTGGCCCTTGCTGCAGCCCAACTGCTGGGCTGCCAGGGTAAAGCTGCCGGCCTCCACCAACACTGCAAATGCCGCCAGGTCATCCATCTCACTCACGGA TTGTTTCCATTTGAAAACCAAAGGTTGCCTATTAGCGCGTTAATCCATGAAAAAAACCACTCTAGACTGCAACCTCATCCCCCTTTTCGAGGAACAGCCC
DNA Sequence for Gene
>AA097_RS05910
ATGAAGATTCTCTTGATCGGTGCCAACGGCACCATTGGTTCGGCGGTCGCGCGGGAGCTGGAACAACGTCATGAAGTGGTACGCATCGGCCGTACCAGCG GTGATTTCCAGGTGGATATCAGCGACAGCCAGTCGATCCGCGCCCTGTTCGAGAAGACCGGGCGCTTCGATGCGCTGGTGTGTGCCGCCGGTAACGTGAC CTTCGCACCACTGGAGGAAATGACTGCCGAGCACTTCAGCCTGGGCCTCGAGGACAAGCTGATGGGCCAGGTCAACCTGCTGCTGATCGGCCGCGAGTAC GCCAACGACGGCGCCTCCTTCACCTTCACCACCGGCGTACTGAGCCACGACCCGATCCGCAGCGGCGCCTCGGCCGCCCTGGTCAACGGCGCCATCGACA GCTTCGTGCGGGCCGCTGCCATCGAGCTGCCCCGGGGCCTGCGGGTCAACTCCATCAGCCCCAACGTGCTGCTGGAAGCCATGGACAGCTACGCGCCCTA CTTCCGTGGCTTCAAGCCGGTGCCGGCGGCCGACGTGGCCCTGGCCTACGCCAAGAGCGTGGAAGGCCTGCAGACCGGCCAGACCTATCGCGTCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCGTTTGCGTGGGGCTGGCTTGTGTAGGAGCTGGCTTGCCAGCGAAGGCGTCCTCCCGAACCCCACCAGACTTCAGGGCCTCTTCGCCGGCAAGCCGG CTCCTACGGTTGGGCGCTGCTGCGTTCAGTCCGGGCTTGTGGTGACCGGGCGGGCTGCGTAACGTGTCGGCTTCCGCTTGGAGGCCCAATGATGCGCACC GCCCGTTCCCTGCTTTGTTTCGCCCTGTTGCCGCTGTTTGCCGGCTGCCAGATGCTGCCGATGTTCAACCCACAGCCCCAGGCGCCGTCCATGGCCGGGT TGACCCGGATGCAGGGTGAACTCAGTGCCGCCGATGGCAAGCTGCTATTCAAACCCTGCACCGAAGACCGCCGTTATGTGGTCAACGATGGCGGCAACAC CAGTGTGCTGCAGGAGGCAGCAACCCTGGCCGAGAAGCAGGGCAAGCTGTTTGCCGACCTGCGGGGCAAGTTCTCCGCCAATGCCAGCAGCGACGGCCAG
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGANGTIGSAVARELEQRHEVVRIGRTSGDFQVDISDSQSIRALFEKTGRFDALVCAAGNVTFAPLEEMTAEHFSLGLEDKLMGQVNLLLIGREY ANDGASFTFTTGVLSHDPIRSGASAALVNGAIDSFVRAAAIELPRGLRVNSISPNVLLEAMDSYAPYFRGFKPVPAADVALAYAKSVEGLQTGQTYRVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site