Pseudomonas fluorescens AU13852, AA097_RS27210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTTCACCCTGGCCTGTGGCAGCGGCCAGTTGCTGGGCGAACTGATCGGCCAGCGCTCCACCAGTATCGACATGCAGGGCCTGGCGCCCCGCGTTGCCTG AACGTTAAAAGGAGTCTTCAGATGAGTATCCAGCGTATCCACAGCAACGAGCGCCTCAGTGGCGCGGTGACCTTTGCCGCACTGGTGTTTCTTTCCGGGC AGGTGCCGGGGGCCAGCAGCGATATCGGCGGCCAGACCCGCGAGGTGCTGGAGAAGATCGACGCCTTGCTGGCCGAGGCTGGCAGCGACAAGGAGCACCT GCTCAGCGCGACGATCTACCTCAAGGACATCCAGGCCGATTTCGCGGTGATGAACGAAGTCTGGTCGGCCTGGCTGTCCCCCGGCCAGGCGCCGGCGCGC ACCACCTTGCAGGCGGCCCTGGCGCGCCCGCAGATCCTTGTCGAAATCAGCGTCATCGCGGCCCGCCGCTAACTGCCCTTACCCACAACGGAGAATAACA
DNA Sequence for Gene
>AA097_RS27210
ATGCATAAGATCACGTTGCTCGGCTGCACCTTGGGGCTGCTGTTCAGCGCCATGTCCCAGGCCAATGAAGCACCTCTGGAGGGCACCCTGGCGAAGATCG CCAACAGCGCCAGTATTACCTTGGGTTATCGCGATGCCTCGGTGCCCTTTTCCTACGTGGGGGATAACAGCGGCAAGCCCATGGGCTATTCCGTGGAGCT GGCGAGCAAGGTGGTGGAGCGCATCCAGCAGCAGTTGCACCTGCCCAACCTGAAGGTGAAATACAACCTGGTGACCTCGCAGACACGCATTCCCCTGGTG CAGAACGGCACCGTGGACCTGGAGTGCGGTTCCACCGGGGTGACGGCCGAGCGGCAGAAGCAGGTGGCGTTCTCCTACGGCTTCATCTACGTCAAAGGCC AGTTGCTGACTGCCAAGGACAGCGGGATCAAGAGCTTCGCCGACCTGCGGGGCAAGAACGTGGTGACCACGGCGGGGACCACCAACGAGCGCTTTCTCAA GAGCTACAACGTCGAGCACAAGATCGACATGTTCGTGATCAGCGCCAAGGACCACGGCGAGGCCTTCCAGATGCTCCAGTCGGGGCGTGCGGCGGCGTTC TACATGGACGATGCGTTGCTGTACGGCGAGCGGGCCAAGGCCCGGGACCCGCACAACTGGGTGGTAGTGGGGGAAGAACAGTCGCGCGAGATCTACAGCT GCATGGTGCGCAAGGATGACCCGCAGTTCCTGGCCCTGGTCAACGGTGCCCTGGCGGACCTGTACCGCTCCGGGGAGATCAACGGCATTTACCAGCGCTG GTTCCAGCAGCCGATTCCGCCCAAGGGCCTGAACCTGGAATTCCCCATGACCAGTGAACTCAAAGCGATCATCGCCCAGCCCACCAGCGATCCGGTGCAA TAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACCACCATGAGGGGTTAGAAGTCGCCCCACAGTTGCTGGGCCACGGCCAGGGCCACCACGGGAGCGGTTTCGGTACGCAGCACTCGTGGCCCCAGGCG CGCGGGGAGGAAACCGGCGCTGTGGGACAGTTCAACTTCGGCGTCTGTCAGGCCGCCTTCAGGGCCAATGAGGAACGCCAGGCTGGCAGGCTTGGCGTGG CTTTCCAGGGGCTGGGCCACGGGGTGCAGCACCAGCTTCAGGTCGGCCCGGGCCTGCTTGATCCAGTCCGCCAGCAGCACGGGCGGGTGGATCACCGGGA CCTGCGAGCGGCCGCACTGTTCGCAGGCGCTGATGGCCACCTGGCGCCAGTGCAGCAGGCGCTTGTCGGCGCGTTCGTCCTTGAGCCGCACTTCGCAGCG CTCACTGAAGATCGGGGTGATTTCGCTGACCCCAAGCTCCGTGGCTTTCTGGATCGCCCAGTCCATGCGCTCGCCCCGGGACAGGCCCTGGCCCAGGTGA
Amino Acid Sequence
>ABC transporter
MHKITLLGCTLGLLFSAMSQANEAPLEGTLAKIANSASITLGYRDASVPFSYVGDNSGKPMGYSVELASKVVERIQQQLHLPNLKVKYNLVTSQTRIPLV QNGTVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTAKDSGIKSFADLRGKNVVTTAGTTNERFLKSYNVEHKIDMFVISAKDHGEAFQMLQSGRAAAF YMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGALADLYRSGEINGIYQRWFQQPIPPKGLNLEFPMTSELKAIIAQPTSDPVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site