Pseudomonas fluorescens AU13852, AA097_RS25410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_38, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGACGTGCTGGAACAGATCGTCGGCGACATCGAGGACGAGCATGACGTCGAGGAGGACAGCTACATCAAGCCACTGCCCAGCGGCGACTTCCTGATCAAG GCGCTGACCCCCATCGAGAACTTCAACGAGTTTTTCGACAGCGACTTTTCCGATGACGAATTCGACACCGTAGGCGGCCTGGTCATGAGTGCGTTCGGCC ACTTGCCAAAACGCAACGAAATCACTGAAATCGGCGCCTATCGCTTCCGCGTGCTCAACGCTGATAGCCGGCGGATTCATCTGCTGCGCCTGACCCCCAT TTCCCGCTGAGGAAACGGGTCATCCGCCCTCCCCCGCACCGCGATATCGTCTTGAGGCCACTTGCCCGGCCTCAGGCGATACAGGGCGGGGACGCATCGG CCGAGCAGCGCTGCGTGACTCGATGCTCATCTGAAACAACCCAACCATTCTCCTCGTGCCCCGCCCGGTACGACACAGGAAAGAGCTGATGAAACGCCTC
|
|
| DNA Sequence for Gene |
>AA097_RS25410
TTGCAGCGCTCAACCCGCCCCGGCTGGCCCGGCAACCTGCTGGCCGTGATCGCCGGCGCCATCACCACCCTGGCCCTGGCCCCCTACAACATCTGGCCTT TGGCGCTGCTGGCAGTCGGCCTGTTCTACGCCGGGCTGCGCGAGCTGACACCGCGTCAGGCCCTGGGCCGCGGCTGGTGCTTCGGCTTCGGCCTGTTCGG GGCCGGCACCAGTTGGATCTACGTCAGCATTCACACCTATGGCGGCGCCTCGGCCCTGCTTGCCGGCCTGCTGATGCTGGCCTTCATCGCTGCCATCGCC TGGTTTTTCGCACTGCCTGCCTGGCTCTGGGCCCGTTGGTTGCGACGCAATGAAGCGCCGCTGGCGGACGCCCTGGCATTTGCGGCCCTGTGGCTGGGCC AGGAAGCCTTTCGGGGCTGGTTCCTCACCGGTTTTCCCTGGCTGTATTCCGGCTACAGCCAGCTTGACGGCCCACTGGCCGGGCTCGCGCCGCTGGGCGG CATCTGGCTGATCTCCTTCTCCCTGGCCCTCACCGCAGCGCTGCTCTACAACCTGCCGCGACTGATCAAGGCCGGGCGCAAAGCCTTCATCGTTGCGGGC CTGCTCCTGCTGGCAGCGCCCTGGGTCGTGGGCCTGGCCCTCAAAGGCCATGCCTGGACCAGCCCCGCCGGAGAGCCGCTATCGGTCGCCGCCATCCAGG GCAATATCGAACAGAGCATGAAGTGGGACCCGGCCGAGCTCAACGCCCAGCTGGCGCTGTATCGCGACATGAGCTTTCGCAGCAAGCGCGTAGACCTGCT GGTCTGGCCGGAAACCGCAGTACCGGTGCTCAAGGAATCGGCCGAAGGCTACCTGACGATGATGGGCAACTTTGCCGCCGACCGTCATTCCGCGCTGATT ACCGGCGTTCCGGTGCGCCAACTGGTACACCATGAAAAGCGCTACTTCAACGGCATCACCGTGACCGGAGAAGGGGACGGCACCTACCTCAAGCAGAAGC TGGTGCCTTTTGGCGAGTACGTGCCCCTGCAGGAAGTGCTGCGCGGCCTGATCGACTTCTTCAACCTGCCGATGTCGGACTTCGCCCGCGGCCCGGCCGA CCAGCCGCTGCTACAGGCCAAGGGCTATCAGATCGCGCCGTTCATCTGCTACGAAGTGGTCTACCCCGAATTCGCAGCTGGCCTTTCGGCCCGTAGCGAA CTGTTGCTGACCATCAGTAACGACACCTGGTTCGGCACCTCCATCGGCCCCCTGCAGCACTTGCAGATGGCGCAGATGCGCGCCCTGGAAGCAGGGCGCT GGATGATCCGCGCGACCAACAACGGCGTCACCGGGCTGATCGACCCGTTCGGCAGGATCACGGTGCAGATTCCCCAGTTCGAACGCGGCATTCTGTATGG CGAGGTCGTGCCCATGCACAACCTGACGCCGTATCTGCAATGGCGCTCCTGGCCGCTGGTGGTGCTCTGCACCCTGCTGTTTGGCTGGGCCTTGCTGGCC AGCCGGATCGCCAAGACCGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGCCCTCGCTGGCAATCCGGCTCCCGAGGGAGCCGGATTGCCATCAGCGATAGAACAACCGGTAGCCCAATTGGCCCACTGCCTCATTGAGCAACTGGC CACTCTGCCAGATCGACTTGAACTCGGGCATCCAGCCTCCCAGCGGACGGGCGTTATCCATTCCCAGGAACCCCACTGGCGCAGGCACCACTTCAAACCC GGCGTGCTCGAAACTCCACACTGAGCGGGGCATGTGCCAGGCCTGGGTCACCACCACCACACGCTTGATCCCCAACGGCAGCAGGACCTCGGCGCTGAAC TGCGCATTCTCCCAGGTGGTGCGGCTGCGGCCTTCCTGCCAGCGCACCGTCACGCCAAAGTCATCGAGCAGGGATTGCGCCATCAACGCAGCCTCAGTGG GCGGCGTACCGTAATGCAGGCCGCCACTGGTCAGCACCGGCAGCCCGGAGGCCTTGGCCAGGCGCGCGGCATAGCGTTCGCGCTCCAGGCCCACGCCGGT
|
|
| Amino Acid Sequence |
>acyltransferase
MQRSTRPGWPGNLLAVIAGAITTLALAPYNIWPLALLAVGLFYAGLRELTPRQALGRGWCFGFGLFGAGTSWIYVSIHTYGGASALLAGLLMLAFIAAIA WFFALPAWLWARWLRRNEAPLADALAFAALWLGQEAFRGWFLTGFPWLYSGYSQLDGPLAGLAPLGGIWLISFSLALTAALLYNLPRLIKAGRKAFIVAG LLLLAAPWVVGLALKGHAWTSPAGEPLSVAAIQGNIEQSMKWDPAELNAQLALYRDMSFRSKRVDLLVWPETAVPVLKESAEGYLTMMGNFAADRHSALI TGVPVRQLVHHEKRYFNGITVTGEGDGTYLKQKLVPFGEYVPLQEVLRGLIDFFNLPMSDFARGPADQPLLQAKGYQIAPFICYEVVYPEFAAGLSARSE LLLTISNDTWFGTSIGPLQHLQMAQMRALEAGRWMIRATNNGVTGLIDPFGRITVQIPQFERGILYGEVVPMHNLTPYLQWRSWPLVVLCTLLFGWALLA SRIAKTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|