Pseudomonas fluorescens AU13852, AA097_RS29440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGAGCCCGATGGCAACGTCAGCATTGTCCTGGGCCAGCACCACATTCGTGCCACCACCGGCGAATTCACCTTCACCTCCAAGCTGGTGGACGGCAAGT TCCCGGACTACGAGCGCGTGCTGCCCAAAGGCGGTGACAAGCTGGTACTGGGTGATCGCCAGGCGCTGCGCGAAGCCTTCAGCCGTACCGCGATCCTGTC CAACGAGAAGTACCGCGGCATCCGTCTGCAACTGGCCAATGGTCAGCTGAAGATCCAGGCCAACAACCCGGAGCAGGAAGAAGCGGAAGAAGAAGTGGGC GTGGAATACAACGGTGGTTCCCTGGAAATCGGCTTCAACGTCAGCTACCTGCTGGACGTGCTGGGCGTGATGACCACCGAACAGGTTCGCCTGATCCTGT CCGATTCCAACAGCAGTGCGCTGGTGCAGGAATCCGACAACGACGACTCGGCTTACGTTGTCATGCCGATGCGCCTGTAATCATGCTCAGCAGAAGCTAG
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| DNA Sequence for Gene |
>AA097_RS29440
ATGTCCCTCAGTCGCGTCTCGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCTTCTCCCCCTCCCCCCGCATCAACCTTCTCTACGGCGCCAACGGCA GTGGCAAGACCAGCGTGCTGGAAGCCATCCACCTGCTGGGGCTTGCCCGCTCGTTCCGCAGTGCCCGCCTGTTGCCGGTGATCCAGTACGAGCAACTGGC CTGCACGGTGTTCGGCCAGGTGGAGCTGGCCCAGGGCGGCCATAGCAGCCTGGGGATATCCCGTGATCGCCAGGGGGAATTCCAGATCCGTATCGACGGT CAGAATGCCCGCAGCGCGGCGCAGTTGGCCGAGATCCTGCCGCTGCAGTTGATCAACCCGGACAGCTTCCGCCTGCTGGAGGGCGCACCGAAGATCCGTC GGCAGTTCCTGGATTGGGGAGTGTTCCATGTGGAACCACGCTTCATGTCCACCTGGCAGCGCTTGCAGAAGGCCCTGCGGCAGCGGAACTCATGGCTGCG GCATGGTACACTTGACGCCGCTTCGCAAGCGGCCTGGGACCGGGAACTGTGTCAGGCCAGCGCTGAAATCGATGAATACCGCCGCGCTTATATCAAAGCC TTGAAACCAGTCTTTGAGCGGACCTTGGGCGAACTGTTGCAGCTCGAGGGCCTGACGCTTAGCTATTACCGTGGTTGGGACAAGGACCGGGAGCTCAGTG AGGTGCTCGCGACCGCCCTCCACCGTGACCAGCAAATGGGTCATACCCAGGCCGGGCCACAACGTGCTGATTTGCGTCTGCGCTTAGGCGGACACAACGC CGCGGACATCTTGTCCCGTGGCCAGCAGAAGTTGGTGGTCTGTGCCTTGCGCATTGCCCAGGGGCATCTGGTGAGCCAGGCCCGCCGCGGTCAGTGTATT TATCTGGTGGATGACTTGCCGTCCGAGCTGGACGAGCAGCACCGCCGCGCACTTTGTCGCTTGTTGGAAGACTTACGCTGCCAGGTGTTTATCACCTGTG TAGACCACGAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGA GTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCATGAGCGAAGAAAATACGTACGACTCGACCAGCATCAAGGTGCTGAAAGGTTTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGCGACACC GATGACGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGATAACTCCATCGACGAAGCGCTGGCCGGCCATTGCGACGACATCAGCATCATCATCC ACCCGGATGAATCCATCACCGTGCGCGACAACGGTCGCGGCATCCCGGTAGATGTGCATAAAGAAGAAGGCGTCTCGGCGGCAGAGGTCATCATGACCGT GCTCCACGCCGGCGGTAAGTTCGACGATAACTCCTACAAGGTCTCCGGCGGTCTGCACGGCGTAGGTGTGTCGGTAGTGAACGCCCTGTCCGAAGAGCTG ATCCTCACCGTGCGCCGTAGCGGCAAGATCTGGGAACAGACCTATGTCCACGGTGTTCCGCAAGAGCGGATGAAGATCGTTGGCGACAGCGAAACCACCG
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| Amino Acid Sequence |
>DNA recombination protein RecF
MSLSRVSVTAVRNLHPVTFSPSPRINLLYGANGSGKTSVLEAIHLLGLARSFRSARLLPVIQYEQLACTVFGQVELAQGGHSSLGISRDRQGEFQIRIDG QNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRHGTLDAASQAAWDRELCQASAEIDEYRRAYIKA LKPVFERTLGELLQLEGLTLSYYRGWDKDRELSEVLATALHRDQQMGHTQAGPQRADLRLRLGGHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI YLVDDLPSELDEQHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRITQTHDHRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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