Pseudomonas fluorescens AU13852, AA097_RS28490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_36, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGACCGGGGTCATCCGCATCACCCGCATGCGTGCGTAGCCCGTCCATTACAAGGAGTCATTCATGACCAAGACTGTTATCACCAGCGACAAGGCACCT GCTGCCATCGGCACCTACTCCCAGGCGATCAAGGCTGGCAACACCGTCTACATGTCCGGCCAGATCCCTCTGGATCCCAAGACCATGGAGCTGGTGGAAG GCTTCGAAGCCCAGACCGTCCAGGTGTTCGAGAACCTCAAGTCGGTAGCCGAGGCCGCTGGCGGTTCGTTCAAGGACATCGTCAAGCTGAATATCTTCCT CACCGACCTGAGCCACTTCGCCAAGGTCAACGAGATCATGGGCAAGTATTTCCAACAGCCTTACCCAGCCCGCGCCGCCATCGGCGTGGCCGCCCTGCCA AAGGGTGCACAGGTTGAAATGGATGCCATCCTGGTCATCGAGTAACACCTGCGGCGCAGCCTTCAAGGCTGCGCCGTTTTCGTTCTGAAAGGATTTCGTC
DNA Sequence for Gene
>AA097_RS28490
ATGCGCCAAGCGCTAGCTGTTTCGCTGCTCGCCGTACTGCTCGGCGGTTGTGCCAGCGACCCCGCCAAAAACGATGTGGGCGGCATCTGGATCAATCAGG TAGCGATCGACGCAGCCTCCAAGGGCGGCCCTTTGCGTGAAGCCCTCCAGGCCTACGGCCCGAACCTGGAATGGGAGCTCAATACCAAGGCTGGCCAGGC CCGCTACACCAACGGTTTCGAAACCGTCGAAGGCAAGATCATCGGCGACGGTTCCAGCACTGCAAAAGTCGAGTTCTATGGCAGCGCCGCCACCGACTTG AAGCGCCACGGCAAGCAACTGCTGCAAGAGGCCAACGACAATGAGCCCGAGCAGGTCTTCGACCGTCCCAAAGACCCCGCCCCCGAAGGCGCGCCGCTAG GCGCCAACTTCGAGCGCGCCTTGTACTCGGCGTATCTGGGTGGCAAGTGGAAGATCGTCAACGGACCGGGCCTGGGCAACGAAGTGCAGTTCCAGGCAAA CGGCGCCGTCCAGGGCCTGCCGGGCGCCGATCGCTACGCCTTGTGCCTGGCGGGCGACTGCGCCTCGATGAGCGGCGGCAACGATAGCATCTGGCTGCAG CTCAACGGCCAGGGCAACTCCTGGATCTTCGTGCGCAAGGATCAACAGCTGGAGATCTTCCAGGCCGTGAATACCGCCCTGGCGGATGAAGTGCCCTCGC TGACGCCGGGCAGCCAGCAGTGGTTGCTGGAAAAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACCCTGTAGCCGCTGCCGCAGGCTGCGACAAGGTCCACAGGACCTTCGGCCTGTCGGCAGCGACGCCCTCGGGAAGCCGGTCGCAGCCTTCAACCGCC CTCCCCTAAAGCTGCTCGGGCAGCTTAGCCCTGCGTCGTCAGAATCGCTGCATAACCTTCGCGATAACTCGGATAGCGCGGCACCCAGCCCAGCGCCCTG GCCCGGGCGTTGCTGCAACGCTTGCTGCCGGTACGACGCACGCTGGCATCGTCCGCCCATTCGGTGACGCCCAGGTAATCGCGCAGCCAGTCGACGACCT CCGCCAGGGGCGCGGGCGCATCGTCCACGCCGATATAGCAATCATCCAGCGCCTTGCCACTGCGGTCCGCCTTGAGCAGGAACGCCAGCAGGCCCGCAGC ATCGTCCGCGTGAATACGGTTGCCGTACAGCGGCGGCTCGATCGCCACGCGATAACCCCGGCGCACCTGGGTCAGCAGCCACTCGCGACCCGGGCCATAA
Amino Acid Sequence
>lipoprotein
MRQALAVSLLAVLLGGCASDPAKNDVGGIWINQVAIDAASKGGPLREALQAYGPNLEWELNTKAGQARYTNGFETVEGKIIGDGSSTAKVEFYGSAATDL KRHGKQLLQEANDNEPEQVFDRPKDPAPEGAPLGANFERALYSAYLGGKWKIVNGPGLGNEVQFQANGAVQGLPGADRYALCLAGDCASMSGGNDSIWLQ LNGQGNSWIFVRKDQQLEIFQAVNTALADEVPSLTPGSQQWLLEKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site