Pseudomonas fluorescens AU13852, AA097_RS28260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACAGCGGTTAGCTGGCGTCGGTCGGGCTGAGGAAGGCCGACGGTGCGTTACAAAGCCAGGCACTGCGCTTAGACTTGAGTCGGGTTTGTTTTCCTGGGG CAAGTCCACCAATTCGGGAGAGAGTTTCATGAAGCTAGTCACTGCCATCATCAAGCCGTTCAAGTTGGACGACGTGCGCGAGTCGCTGTCCGAGATCGGC GTGCAGGGCATTACCGTCACTGAAGTCAAAGGCTTCGGTCGGCAGAAGGGTCACACCGAGCTGTATCGCGGTGCGGAGTACGTGGTGGATTTCCTGCCCA AGGTGAAGATCGATGTCGCCATTGACGACAAGGATCTTGACCGGGTTATCGAGGCGATAACCAAGGCCGCCAACACCGGCAAGATCGGTGACGGCAAGAT CTTCGTGGTCAATCTGGAACAGGCTATTCGCATCCGTACCGGCGAAACCGATACCGACGCAATCTAAGCCGCCAAACCCAACGCCCCAGGAGAAAACAAT
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| DNA Sequence for Gene |
>AA097_RS28260
ATGACTCTGCGTAAATTCGCAGGGCTAGGAGCCCTTTTGTCCCTCGTAATGCCAGGCCTGGCCATGGCGACAGACGAAGCGGCGGCTCCAGTCCTCAACT CCGGCGATACCGCCTGGATGCTGACCTCCACAGCCCTGGTGCTGTTCATGACCATTCCTGGCCTGGCGCTGTTCTACGGCGGCATGGTGCGGTCTAAAAA CATTCTTTCGGTAATGATGCAGTGCTTCGCCATTACCGGCCTGATCACTGTCCTGTGGTTCATCTACGGCTACAGCATGGCGTTCGACACCACCGGGATG GAAGCCGGCGTGGTCAACCTCAATTCCTTCGTGGGCGGCTTCTCCAAGGCCTTCCTGGCGGGCATCACCCCGGCCAGCCTGACCGGCCCGGCTGCGCTGT TCCCTGAAGCGGTGTTCGTCACCTTCCAGATGACCTTCGCCATCATCACTCCAGCACTGATCGTCGGTGCCTTCGCCGAGCGGATGAAGTTCTCCGCCAT GCTGATCTTCATGGGCGTGTGGTTCACCCTGGTGTATGCGCCGATCGCCCATATGGTCTGGAGCGGTCCGGGCTCGCTGCTGGGCGACTGGGGCGTGCTG GACTTTGCCGGCGGCACCGTGGTGCACATCAACGCCGGTATCGCGGGCCTGGTGGCTTGCCTGGTGCTGGGCAAGCGCAAGGGTTTCCCGACCACGCCGA TGGCGCCACACAACCTGGGTTACACCCTGATGGGCGCAGCCATGCTGTGGATCGGCTGGTTCGGCTTCAACGCCGGTTCCGCCGCTGCCGCCAACGGCAC CGCCGGCATGGCCATGCTGGTCACGCAGATCGCGACGGCCGCCGCCGCCCTGGGTTGGATGTTTGCCGAGTGGATCACCCACGGCAAGCCTAGCGCGCTG GGCATCGCTTCGGGTGTGGTCGCAGGCCTGGTGGCAATCACTCCGGCTGCCGGTACCGTTGGCCCGATGGGCGCCCTGATCATCGGTCTGGCGGCCGGTG TGGTGTGCTTCTTCTGCGCCACCAGCCTCAAGCGCAAGCTGGGATATGACGACTCCCTGGATGCCTTTGGCGTGCACGGCATCGGCGGTATTCTCGGTGC GATCCTCACCGGTGTGTTCGCCGCTCCGTCCCTGGGTGGTTTCGGCACCGTCACCGACGTTGCGACTCAGGTCTGGATCCAGGCCAAGGGCGTGGGTTTC ACGGTGATCTACACCGCGATCGTCACCTTCATCATCCTCAAGGTTCTGGACGCGGTCATGGGGCTGCGGGTGAGCGAGGAAGAAGAGGCGGTCGGCCTCG ATCTGGCACAACACAACGAGCGTGGTTACAACCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCGCAAGAAAAAAAGCCCGGCTCCGGCCGGGCATTTTTTTGCCTGAAGTTTGTCATTGAGAAAGGCTGAAAGGATTTTCTGACAAGCATTGGCGTGTT TGTCGTGACGATTTCCGGCAGGGCAAATGCTTACACTAAAGCAGGATTATTCGGCGCTTTGTTTTTTCCCTGAGCGCGCTAGAATGCGCGCCGAAGCGTG GAGATCGGTATGTGGCAACAGACCCTGATTACCCTGCGGGCCAGGCCCCGGGGCTTTCATCTGGTGACGGACGAGTTGCTCGCCGGCCTGCCTGAGTTGA AGGCATGTCGGGTTGGCCTGTTGCATCTGTGGCTGCAACATACCTCGGCCTCGTTGACCATCAACGAGAACGCCGATCCGGCGGTACGGCGTGACTTCGA GCGTTACTTCAACACCCTGGTGCCTCAAGGCATGGCCGGGTACGAACATAACGACGAAGGCGCGGATGACCTGCCGGCGCACTTCAAGGCCAGTTTGCTA
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| Amino Acid Sequence |
>ammonia channel protein
MTLRKFAGLGALLSLVMPGLAMATDEAAAPVLNSGDTAWMLTSTALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITGLITVLWFIYGYSMAFDTTGM EAGVVNLNSFVGGFSKAFLAGITPASLTGPAALFPEAVFVTFQMTFAIITPALIVGAFAERMKFSAMLIFMGVWFTLVYAPIAHMVWSGPGSLLGDWGVL DFAGGTVVHINAGIAGLVACLVLGKRKGFPTTPMAPHNLGYTLMGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSAL GIASGVVAGLVAITPAAGTVGPMGALIIGLAAGVVCFFCATSLKRKLGYDDSLDAFGVHGIGGILGAILTGVFAAPSLGGFGTVTDVATQVWIQAKGVGF TVIYTAIVTFIILKVLDAVMGLRVSEEEEAVGLDLAQHNERGYNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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