Pseudomonas fluorescens AU13852, AA097_RS28080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGAGCGATCATTTTGCATGGGCCACACCACTCGGCCCAGTAATCGACCAGTACAGCGCCTTCGGCTTTGAGTACGTCGGCCTCGAAGCTGGCGTCGCTG ACGTGTTTGATAAGATCGCTGCTCATGGAATTCTCCAGGTTGTAAGCAAAAAAACGTGGCCCATCATATCTGCCCTTCCCGCGTTCAGGAAGCCGCAGAT GATTGACTCTAACTATGGTGCCCCACGAGTTTGGGTATAGCTCAGCCGGGGACGTTGCGGGGGTTGCGCAGGCCATTTGGTGAACCCGCCGAGCACCGTG CACCTGTCGCAGCAGGGTCTTCGCCTGGCTGCCAAGGAGCGGCTCGCCCGATTGAACGGGATCTTTCCTGGCCACGGAACAGCCGGCCCGCCGCCCCGGC GCAGGCTTTTATGCGTTGAATCAACGCATTGGACACTGCGCGTTGGCGCGAGCCGTTGATCGTGGCACGATGGCGAGGTTATCGACCGAGACCCCCAAAC
|
|
| DNA Sequence for Gene |
>AA097_RS28080
ATGCCCCAATCCCAAGCCAAGAATCTGTCCCTGATCGCCGCGATCGATCTGGGCTCCAACAGCTTTCACATGGTCGTGGCCAAGGCCCGGAATGGTGAAA TCCGCATTCTCGAGCGGCTCGGAGAAAAGGTTCAACTGGCCGCCGGCATCGACGAAGAACGCCAGCTCAACGAAGAATCCATGCAGCGCGGTCTCGACTG CCTCAAGCGCTTCGCCCAACTGATCAACGGCATGCCCCAGGGCACGGTGCGCATCGTCGGCACCAACGCCCTGCGCGAAGCCCGCAACCGCGGCGAATTC ATTCGCCGCGCCGAGGAAATCCTCGGCCACCCGGTGGAAGTCATCTCCGGCCGTGAAGAAGCCCGCCTGATCTACCTCGGGGTGTCCCACACCCTCGCCG ACACTCCGGGCAAGCGTCTGGTGGCCGACATCGGCGGCGGCAGTACCGAATTCATCATCGGCCAGCGCTTCGAACCCCTGCTGCGCGAGAGCCTGCAGAT GGGCTGCGTAAGCTTCACCCAGCGCTATTTCCGCGACGGCAAGATCACCCCTGCCCGCTATGCCCAGGCCTACACCGCCGCACGTCTGGAGATCATGAGC ATCGAGCATGCCCTGCATCGCCTGACCTGGGACGAAGCCATCGGCTCCTCCGGGACCATTCGCGCCATTGGCCTGGCCCTCAAGGCTGGTGGCCAGGGCA GCGGCGAGGTCAACGCCGAAGGGCTGGCCTGGCTCAAGCGCAAGCTGTTCAAGCTCGGCGACGCCGAGAAGATCGATTTCGAAGGTATCAAGCCCGACCG CCGGGCGATCTTTCCCGCCGGCCTGGCAATTCTCGAAGCGATCTTCGACGCCCTGGAACTGCAACGCATGGATCACTGCGAAGGCGCCCTGCGTGAAGGC GTGCTCTACGATCTGCTGGGCCGCCATCATCACGAAGACGTCCGCGAACGCACCCTCAGCTCGCTCATGGAGCGCTACCACGTCGACCTGGAACAAGCCT CGCGCGTTGAAGGCAAGGCCCTGCGCGCCTTCGACCAGGTTGCCGCGGACTGGGACCTGGAGGACGGCATCTGGCGCGAACTGCTGGGCTGGGCGGCCAA GGTCCATGAAGTGGGGCTGGACATCGCCCACTATCACTACCACAAGCACGGCGCCTACCTGATCGAGCACTCGGACCTGGCGGGTTTCTCCCGGGAAGAC CAGCAGATGTTGGCTCTCCTGGTGCGCGGCCACCGCCGCAACATTCCCAGGGAGAAATTCGCCGAGTTCGGCGACGACGGCATCAAGCTGATCCGGCTGT GCGTGCTGCTGCGCTTTGCCATCCTGTTCCACCACATCCGCGGCACCCAACAGATGCCCCAGGTGAGCCTGCGCGCCAGCGGCGATCAGCTGGACGTGGA ATTCCCGGAGCACTGGCTGGATGAAAACCAGCTGACCCAGGCCGACTTCGCCCTGGAGGCCGAATGGCTGACACGGGTGGGCATCGTGCTCAACGTCAAC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCTGCCACCGGCTTGCCGGCGGCAAGGCCGCAAACCCTTGCCTCGCCCTCAGGGGCGCCTTCGCTGGCAAGCCCGCTCCTACGGCTCTTGCAAGCCGCA CAAAAAAGGCCAGCCCGGTGATCGGGCTGGCCTTTTTATTATCGGCGACGCCTGACGCGCTTAGCGCACCGGCAGCACCGGGCTGCCAAGGCGCTCCAAC AGGGTTGCCTGGGCACTGCGCGGGTTCTGGTTGCCGGTCGGCGTGTTGCGGATATAGCGGCCGTCGGACTGCAGGCTCCAACTGTGGGTGTTGTCGGTGA GATAGCTCTCCAACTCTTTCTTGACCCGCAGAATCAGCTTCTTGCCCTCCACCGGGAAGCAGGTCTCGACCCGCTTGTCGAGGTTGCGCTCCATCCAGTC GGCGCTGGAAAGGAACATCTGCTCCTCGCCGCCATTGAGGAAGTAGAACACCCGGGTGTGCTCCAGGAAGCGGCCGATGATCGAGCGTACGTGGATGTTG
|
|
| Amino Acid Sequence |
>exopolyphosphatase
MPQSQAKNLSLIAAIDLGSNSFHMVVAKARNGEIRILERLGEKVQLAAGIDEERQLNEESMQRGLDCLKRFAQLINGMPQGTVRIVGTNALREARNRGEF IRRAEEILGHPVEVISGREEARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFRDGKITPARYAQAYTAARLEIMS IEHALHRLTWDEAIGSSGTIRAIGLALKAGGQGSGEVNAEGLAWLKRKLFKLGDAEKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREG VLYDLLGRHHHEDVRERTLSSLMERYHVDLEQASRVEGKALRAFDQVAADWDLEDGIWRELLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSRED QQMLALLVRGHRRNIPREKFAEFGDDGIKLIRLCVLLRFAILFHHIRGTQQMPQVSLRASGDQLDVEFPEHWLDENQLTQADFALEAEWLTRVGIVLNVN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|