Pseudomonas fluorescens AU13852, AA097_RS27295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1210 1310 1.4E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 904 1026 3.59E-15
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1690 1823 3.2E-22
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1848 1961 2.6E-37
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1645 1663 7.5E-9
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1500 1684 2.5E-60
Coils Coil Coil - - 1391 1418 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 628 708 2.5E-13
Coils Coil Coil - - 723 743 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1066 1163 1.0E-5
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1548 1684 8.3E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 2.75E-20
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1589 1603 7.5E-9
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1498 1684 1.0E-51
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1208 1306 2.13437E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 550 2.12E-15
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 626 723 5.5E-7
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1068 1167 2.7E-13
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1850 1961 2.4E-27
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 763 837 6.23843E-9
Pfam PF02895 Signal transducing histidine kinase, homodimeric domain IPR004105 Histidine kinase CheA-like, homodimeric domain 1362 1498 1.5E-5
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 626 750 1.22E-25
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 763 859 1.1E-8
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1064 1200 7.3E-25
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 129 1.0E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1208 1327 3.27E-27
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 765 862 2.2E-12
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 626 719 1.17513E-7
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1206 1336 4.5E-30
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 627 751 0.0
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1544 1685 1.8E-23
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1360 1499 5.4E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1208 1305 1.4E-8
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1501 1682 1.44E-34
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1846 1966 8.11E-38
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1684 1817 7.98E-24
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 760 883 8.2E-20
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 905 1032 1.1E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1669 1682 7.5E-9
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1757 1819 1.2E-19
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 626 759 6.1E-28
SMART SM00260 chew_2 IPR002545 CheW-like domain 1677 1821 2.0E-27
Coils Coil Coil - - 1464 1484 -
Gene3D G3DSA:3.40.50.2300 - - - 1850 1969 2.6E-41
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 107 1.7E-6
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1066 1183 1.11E-24
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1850 1961 2.17773E-32
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 763 886 6.41E-21
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1066 1154 6.17229E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.