Pseudomonas fluorescens AU13852, AA097_RS15170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_35, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGACTCGGCACGCATCGGCAGCTCCCGGGCCATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACCCCGATCCGCCTGTTCGACGGTGGCGAGCAGA AGCGCTGCTTCACTGACATCGCCGACGGCATCGAAGCCCTGGCACGCATCGTCGACAACGAAAACGACTGCTGCAACGGCCAGATCATCAACATCGGCAA CCCGGACAACGAAGCCAGCATCCGTCAGCTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCTCACCCGCTGCGCGGCAACTTCCCGCCGTTCGCCGGTTTC CGTGATGTGGAGAGCAAGGCGTTCTACGGTGCTGGCTACCAGGACGTGGAACACCGCAAGCCAAGCATCGAAAACGCCAAGCGACTGCTGAACTGGGAGC CGACCGTGGAGATGAGCGAAACCATCGGCAATACCCTGGACTTCTTCCTGCGTGAAGCGATGCTGGAAATCGCTGACCGCGCCAAGCAAGAAGCACGCTG
DNA Sequence for Gene
>AA097_RS15170
ATGCAGGCAGGTCTGCGCATTGATGTCGATACCTACCGCGGCACCCGGGAGGGGGTGCCACGGCTGCTCGAATCGCTGGAGGAAGCCGGGGTCAAGGCCA CGTTTTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACCTGTGGCGCCTGATCCGTCCGCAGTTCCTCTGGAAAATGCTGCGGTCCAATGCCGCGGG CCTGTATGGCTGGGACATCCTCCTGGCCGGCACTGCCTGGCCGGGTAAACCCATTGGCCGGGACCTGGGGCACTTGATGCGCCAGACCCTGGCCGCCGGT CATGAAGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAACACCGGGCGCTGGAGCCAGGCACAGCTGATCGAGCAGATCCGCCGTGGCGTCG ACAGCCTCAACGATATTCTCGGGCAAGCGGTGAGCTGCTCGGCGTCCGCCGGTTGGCGCGCCGATGAGCGGGTCATCGAAGCCAAACAGCAATTCGGCTT TCGCTACAACAGCGACTGCCGCGGCCAGAGCCTGTTCCAGCCACGACTGGCGGACGGCAGCCTGGGCGCTCCACAGATTCCGGTGGACCTGCCGACCTTC GACGAAGTGGTCGGGCCGGTGGTGGCCGCCAAGGATTTCAACAGTTACATCCTCGACCGGTTCAGCCCGGACAAACTCAACGTCTATACCGTGCATGCAG AAGTAGAAGGGATTCTCATGGCCAACGATTTCCGCCAGTTGCTGGCCAGCGCCAGGCAGCGCGACATCCACTTCCAACCCCTGGGCGACATGCTCCCGGC GGATCTGGCCAGCCTGCCCGCGGGCAAGGTGGTGCGCGGTGCGCTGGAAGGCCGTGAAGGCTGGCTGGGAGTGCAAGGCGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAGACGTTGGGCTCTGCCGCTGCTGCTGATCGCGTTCGGCCTGTTCTACCTGCTGCCCCTGGCCACCCACGGCCTGTGGATCCCCGATGAAACCCGCTA CGCGCAGATCAGCCAGGAAATGCTCCTGAGCGGCAAATGGGCGTCGCCGCACTTCATGGGCATTCGCTATTTCGAAAAACCGGTGGCGGGCTACTGGATG ATCGCCATCGGCCAGGCGCTGTTTGGCGACAACCTGTTCGGCGTGCGCGTGGCCTCGGCCCTGAGCACCGGCCTGAGCGTGGTCCTGGCCTACCTGCTGG CCCGGCGCCTGTGGAACGATCCACGCAAGAGCCTGGCCAGCGCCCTGCTCTACATGAGCTTTACCGTGGTCGCGCTGCAGGCCGGCTACGCCAACCTCGA TCCGCAATTCACCTTCTGGGTCAACCTGAGCCTGGTGGCGCTGTGGTTCACCTTCGACTGCCGGACAACCCGCGGCCAGGTGCTGGCCTGGGTGGTGCTG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTYRGTREGVPRLLESLEEAGVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQTLAAG HEVGLHAWDHHGWQANTGRWSQAQLIEQIRRGVDSLNDILGQAVSCSASAGWRADERVIEAKQQFGFRYNSDCRGQSLFQPRLADGSLGAPQIPVDLPTF DEVVGPVVAAKDFNSYILDRFSPDKLNVYTVHAEVEGILMANDFRQLLASARQRDIHFQPLGDMLPADLASLPAGKVVRGALEGREGWLGVQGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site