Pseudomonas fluorescens AU13852, AA097_RS03650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_32, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTGAACAGTTTCCTGATATAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTACCAGCAAGCTGTTGGTGACACTG GTTCGCCAGAAGTGCAAGTTGCACTGCTGACCGCCAACATCAACAAACTGCAAGGTCACTTCAAAGCCAACGGTAAAGACCACCACTCCCGTCGTGGCCT GATCCGCATGGTAAACCAGCGTCGTAAGCTGCTGGACTACCTGAAAGGCAAGGACCTGAGCCGTTACAGCACCCTGATCGGTCGTCTGGGTCTGCGTCGC TAATCAGCGATTGCGCTATGAGGTTGGTTGTTTGCCATGCGTCAGCGGTTTTTCCGCCGGCGTATGGCAGGCTCCCAGCCTCAAGTTTTATCTGCTGCAC TGTTTTACCTGGACAATAAAGGCTGGGCCGATTCCCCGCATTGCCCAAGAATTTCGCAAGAATCAAGTTTCCCCAAGAGCCACAAAGAAGGTAGGACACC
DNA Sequence for Gene
>AA097_RS03650
GTGAACCCGGTAATCAAAAAATTCCAGTTCGGTCAGTCGACCGTAACCCTCGAGACTGGCCGTATCGCCCGTCAGGCCTCCGGCGCAGTATTGGTCACCG TTGACGACGACGTCAGCGTATTGGTGACCGTGGTTGGCGCCAAGCAAGCCGATCCAGGCAAGGGCTTCTTCCCTCTGTCTGTTCACTACCAGGAAAAGAC TTACGCTGCCGGTAAGATCCCTGGCGGTTTCTTCAAGCGCGAAGGCCGTCCTTCCGAGAAAGAAACCCTGACCTCGCGTCTGATCGACCGTCCGATCCGC CCTCTGTTCCCAGAAGGCTTCATGAACGAAGTGCAGGTAGTCTGCACCGTGGTTTCCACCAGCAAGAAGACCGATCCGGACATCGCTGCGATGATCGGTA CCTCGGCTGCCCTGGCGATCTCCGGCATTCCTTTCGACGGCCCGATCGGCGCCGCTCGCGTGGCATTCCACGAAAGCACCGGCTATCTGCTGAACCCGAC CTACGAGCAACTGGCCGCTTCGAGCCTGGACATGGTCGTGGCCGGTACCGAAGAAGCCGTACTGATGGTTGAGTCGGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCCGTACTGTTCGCCCACGACGAATTCCAGTCGGTGATCAAGGCTGTCAAAGAGCTGGCCGCCGAAGCTGCCAAGCCTACCTGGGACT GGGCTGCTGCCCCAGAAGCCACCGAACTGCTGGGCGCTATCCGTGCCGAGTTCGGCGAAGCCATCTCCCAGGCTTACACCATCACCGTCAAGGCCGACCG TTACGCTCGCCTGGGCGAGCTGAAAGACCAGGTCGTCGCCAAGCTCTCCGGTGAAGAAGGCCAGCCTTCGGCGTCCGACGTCAAAGCCGCTTTCGGCGAG ATCGAATACCGCACCGTTCGCGAAAACATCGTCAACGGCAAGCCTCGTATCGACGGCCGCGACACCCGCACCGTACGTCCGCTGAACATCGAAGTTGGCG TACTGCCCAAGACTCACGGTTCGGCCCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTGGTTGCGACCCTGGGTACTGCCCGTGACGCACAGCTGCTGGA CACCCTGGAAGGCGAGAAGAAAGACCCCTTCATGCTGCACTACAACTTCCCTCCGTTCTCGGTGGGCGAGTGTGGTCGCATGGGCGGCGCTGGTCGTCGT GAAATCGGTCACGGCCGTCTGGCCCGTCGTTCGGTCCAGGCCATGCTGCCAGCCGCCGACGTGTTCCCTTACACCATCCGCGTAGTATCGGAAATCACCG AGTCCAACGGTTCCAGCTCCATGGCTTCCGTGTGCGGTGCTTCCCTGGCGCTGATGGACGCTGGTGTACCCATGAAGGCGCCGGTTGCCGGTATCGCCAT GGGCTTGGTCAAGGAAGGCGAGAAGTTCGCAGTCCTGACCGACATCCTGGGTGACGAAGACCACCTGGGCGACATGGACTTCAAGGTAGCCGGTACCGCC AAAGGCGTCACCGCGCTGCAGATGGACATCAAGATCAAGGGCATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGTCAGATGAACCAGATCATCGGTCAGTCCCGTACCGAGCTGTCGGCCAACGCTCCGACCATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTCATCGGTAAAGGCGGCGCCACCATCCGCGCGATCTGTGAAGAAACCAAGGCTTCGATCGACATCGAAGACGACGGCTCGATCAAGATCTTCGGC GAAACCAAGGAAGCTGCAGAGGCCGCGCGCCAGCGCGTTCTGGGCATCACCGCGGAAGCCGAGATCGGTAAGATCTACGTCGGCAAGGTTGAGCGCATCG TTGACTTCGGTGCCTTCGTCAACATCCTGCCGGGCAAGGACGGTCTGGTGCACATCTCCATGCTGAGCGACGCTCGCGTTGAGAAAGTCACCGACATCCT GAAAGAAGGCCAGGAAGTGGAAGTGCTGGTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCCATCAAAGACGTGGCAGCAGCCAAGGCTTCGGGC GTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACCCTTTAGCCTTACGCTGAACAAGCAGACGCCCCGACTGGTTCGGGGCGTTTTGCTATCTGCCATAAGGCCTTCTGGTTGCTGGCCCGGAGCGCGGG TGCTAGGTTTTAGCCCACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCACATTTC GGGTTGAGAGCAGTTTATGGCTGTCTAAACCCACCCTCCCAACAAAGTTCGCCAGGCTTTGAATAAGCGCCTTTGAAAGGCAGGAAACTACGGAGCACCC GCAAAAGTGTGCTTTGGAAGTTTCAGAGGTTCCCGGTGCTATTCAATTGAGCGCTCCTATAGTTGTTTGTGGACGTGCCCCTCTTTGTTCATGCGGATTT AGCAGTCAAGAGAGACTTGTATCAACGAAGACTCTCTGCGCCTGTACTCAGCACCCTGTACTGAGTTTCCAGTGGTTTGCTCGGGGTTATCTGGTTTCGG
Amino Acid Sequence
>polyribonucleotide nucleotidyltransferase Pnp
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVVAGTEEAVLMVESEAKELTED QMLGAVLFAHDEFQSVIKAVKELAAEAAKPTWDWAAAPEATELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRSVQAMLPAADVFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTA KGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQIIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site