Strain | Pseudomonas fluorescens strain AU13852 Contig_32, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGGCTGAGCATGTCGATGGCGCGGATCTGGAAGTCTTGCTCCAGGTAGTCCATGCGCGCGTCGAGGAACTGCTGCATGTGCGGCAGGCTGGAGTGGCTA TCCAGCGCCTCCTGGGAAGCCCAGACCTCGTAGAAAATGAACAGGCTCGGGTCCTGCCGGTCCCGCAGCATGTGGTATTCGATGCAGCCGGCTTCAGCGC GGCTGGCGGCTACATGGCCGAGAAAGAACGCCTCGAAGGCATCAGCCCGCTCCGGGCGGGTCTTGGCGTGGAGGATGAAGGCCTGGGGTGTGGGCATAAG GAGCACTCTTGCTGATGGGGAGGTCGGCAAAAATTCTAAGGCAACAATCCGCTATCGATTCGTGCGTTTGAGTCAAATGTATTTTGAACAACCCGGGCTT ATTCTCCGGCCCTGGCCTGATTAACCTGCCGCCATCGTTTTCAATCTTTACAGCCCGCCGCCACCGATGCGCAACGGGTTGTTCCCGATGAGGCTGGATC
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DNA Sequence for Gene |
>AA097_RS03180
ATGAAAAAAGTACTGCTGCTCAATGGCGCCAAGCAATTCGCCCACTCCGATGGCCGCTACAACGCGACCCTGCACGACACTGCCCTGGCGGTGCTCGACC GGGGGGGTGTGGAGGTCAAGGTCACCCATATCGACGAGGGGTATGACATCCGGGAGGAAGTGGAAAAGTTTCTCTGGGCCGACGTGATCGTCTACCAGAT GCCCGGCTGGTGGATGGGCGCGCCGTGGATCGTCAAGAAATACATCGACGAGGTGTTCACCGAAGGCCACGGCAGCCTCTACGCCAGCGACGGCCGGACC CGCTCCGATGCCTCGCAGAAGTACGGCAGCGGCGGCCTGATTCAGGGCAAGCAGTACATGCTTTCGTTGACCTGGAACGCCCCGCAGCAAGCCTTCGACG ATCCCACCGACTTCTTCGAGGCCAAGGGCGTGGACGCGGTCTACTTCCCGTTCCACAAGGCCAACCAGTTCCTGGGCATGAGCGCCCTGCCGACCTTCCT CTGCGTGGATGTGATGAAACGCCCGAACATCGAAGGCGATGTGCAGCGTTACGAGGAACACCTCAAGGCGGTGTTCAATCTGCCGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCCGGCTACTATTGAGTGCCTTGAAATTCAGGGGCGATGTCGCCCCGCTGCCGCCAGAGGACTCATGTGAAAGCCCGATCCGACGAGTTGCAAGTCTTC GTCTGTGTCATCGAGTGCGGCTCGATTTCCGCCGCCGCCGAGCAGTTGGCCCAGACCCCTTCGGCGGTCAGCCGCAGCTTGTCGCGGCTGGAGGCCAAGC TCGACACCACGCTGATCAACCGCACCACGCGACGCATGGACCTGACCGAGGAAGGGCGCTACTTCTTCGAACAGGCCAAGCTGATCCTCGATCAGATGGA CGAGCTCGAAGAGCGCCTGTCGTCGCGCCAGCGTAATCCGTCCGGGCGCTTGCGGATCAACGCTGCGTCGCCCTTCATGCTGCATGCCATTGTTCCCTAC GTGGCTGAGTTCCGCAGCCTGTACCCGGATATCCAGCTGGAGCTCAACAGCAACGACCTGATCATCGACCTGCTGGAACAGAGCACCGACATCGCCATCC
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Amino Acid Sequence |
>NADPH quinone reductase MdaB
MKKVLLLNGAKQFAHSDGRYNATLHDTALAVLDRGGVEVKVTHIDEGYDIREEVEKFLWADVIVYQMPGWWMGAPWIVKKYIDEVFTEGHGSLYASDGRT RSDASQKYGSGGLIQGKQYMLSLTWNAPQQAFDDPTDFFEAKGVDAVYFPFHKANQFLGMSALPTFLCVDVMKRPNIEGDVQRYEEHLKAVFNLPS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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