Strain | Pseudomonas fluorescens strain AU13852 Contig_31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCAATAAAGATGCCAAGTACTTGCGCGGTCGTTGCTGCACGGCTAGCGGAATCCATGTAAACAACTGATGTCATTGGGTTTTATGCAAACAACTTTCAA GCCCTTGGTTAGTTGCCAACTCACTCAGGCCGGGTGTTTGGCAAGTTGTCCATCTGGTCAGGACCCAAAGCAGTGCACGGTTATTTTCTTAGTTACTTCC CGGTCTTCCCAGCGCCTCCTCAAGCAGCTGATTTGACATAGGAAATCTCGACTATTTTTCGATCCTGTCAAGTGCGTCAAAATGGTGAGAGGCTGCACCA TTTTGCGGAATTTAACTTTTAATCGTTATTTTTCAATAAGTTATATTTAATATAAGCTTATAAAAAATATTCTTGATGTTTCTTTGAAGTGCGACTAGCT TCTAATCCTGTCACCGCTGACAGGATTATTTAAGTTGTCAGCGCGTTCAATAAAAAAGTTAGAACCGACAACAGTCGGTCATGCCTGCGAGGAACTCGGA
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DNA Sequence for Gene |
>AA097_RS12830
ATGTCTCTGTTGATCCGTGGCGCCACCGTTATTACCCATGATGAAAGTTATAAGGCCGATGTTCTATGCGCAGAGGGTGTGATTCGCGCCATCGGCAACG ATCTGGATATTCCCTCCGGTTGTGAAGTACTCGATGGCAGCGGCCAATACTTGATGCCCGGCGGCATCGACCCCCATACCCACATGCAACTGCCCTTCAT GGGCACCGTGGCCAGCGAAGACTTCTTCAGCGGCACCGCGGCGGGCCTGGCAGGCGGCACCACCTCGATCATCGACTTCGTGATTCCCAACCCCCAGCAG TCGTTGCTGGAAGCCTTCCACCAGTGGCGCGGCTGGGCGGAAAAGTCCGCCAGCGACTACGGCTTCCACGTGGCCATTACCTGGTGGAGCGAACAGGTAC GCGAGGAAATGGCCGAGCTGGTGCAGCACCACGGCATCAACAGCTTCAAGCACTTCATGGCCTACAAGAACGCCATCATGGCCGCCGACGACACCCTGGT GGCGAGCTTCGAGCGCTGCCTGGAGCTGGGCGCGGTGCCCACGGTGCACGCGGAAAACGGCGAACTGGTCTATCACCTGCAACGCAAGCTGCTGGCCCAG GGCATCACCGGCCCCGAAGCCCATCCGCTGTCGCGGCCTTCGCAGGTGGAAGGCGAAGCCGCCAGCCGAGCCATTCGCATCGCCGAAACCCTGGGCACGC CGCTGTACCTGGTGCACGTCTCGACCCAGGAAGCCCTGGACGAGATCAGCTACGCCCGGGGCAAGGGCCAGCCGGTCTACGGTGAGGTGCTGGCCGGGCA CCTGCTGTTGGATGACAGCGTGTACCGCGATCCAGACTGGCAGACCGCCGCCGGTTACGTCATGAGCCCACCCTTCCGCCCCCTCGGCCACCAGGAAGCG CTGTGGCGCGGCCTGCAATCGGGCAACCTGCACACCACCGCCACCGACCACTGCTGCTTCTGCGTCGAACAGAAAGCCGCCGGCCGCGACGACTTCAGCA AGATCCCCAACGGTACCGCCGGCATCGAGGACCGCATGGCGGTGCTGTGGGATGAAGGGGTGAATACCGGGCGCCTGTCGATGCAGGCGTTCGTCGCCCT GACCTCCACCAACACCGCGAAGATCTTCAACCTCTACCCGCGCAAGGGCGCGATCCGCGTCGGCGCCGATGCCGACCTGGTGCTCTGGGACCCCCACGGC AGCCGCACCATTTCCGCCAAGACCCACCACCAGCAGGTGGACTTCAACATCTTCGAAGGCAAGACCGTACGCGGCGTGCCCAGCCACACCATCAGCCAGG GCAAGCTGGTGTGGGCCGCCGGCGACCTGCGGGCCGAACGCGGCGCCGGGCGCTACATCGAACGCCCGGCCTACCCGGCGGTGTTCGACCTCTTGAGCAA GCGCGCCGAGCGGCACAAGCCGACGGCGGTTAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCCGGGGGGGGCGTTGCCCCCCCTATCGCGAGCAAGCTCGCTCCTACAGAAACCCATGCCCCCTGTAGGAGCTGGCTTGCCAGCGAAGGCGCCCGCCAA TCCCTTGTAAGAGTCAAAGGCCTATTCGCCGGCAAGCCGGCTCCTACGGATATGGGTGATCCCAGCTATAGAAAATGCCCGTCAGAGGCAACCAAGAAAC GAACCGTGAGGCCAAAACCGTGATCAAGACCTTGAACCACTTGCCCCACCCGACCCTGGACGGCGCCACCCTGGCCGGCCATTTCAGCGACCTGGCGCCG CCGCTCAACGCCCGCCAGGCCCACCTGGAAGCCTCCCGCTGCCTGTATTGCTACGACGCGCCCTGCGTCAACGCCTGCCCCAGCGAGATCGACATTCCTT CGTTCATCCGCAATATCCACACCGACAACGTCCAGGGCGCGGCGCAGAAGATTCTCTCGGCCAACATCCTCGGCGGCAGCTGCGCCCGGGTCTGCCCCAC
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Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVITHDESYKADVLCAEGVIRAIGNDLDIPSGCEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQ SLLEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVQHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLLAQ GITGPEAHPLSRPSQVEGEAASRAIRIAETLGTPLYLVHVSTQEALDEISYARGKGQPVYGEVLAGHLLLDDSVYRDPDWQTAAGYVMSPPFRPLGHQEA LWRGLQSGNLHTTATDHCCFCVEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNTGRLSMQAFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPHG SRTISAKTHHQQVDFNIFEGKTVRGVPSHTISQGKLVWAAGDLRAERGAGRYIERPAYPAVFDLLSKRAERHKPTAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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