Pseudomonas fluorescens AU13852, AA097_RS02710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2300:FF:000346 Diguanylate cyclase response regulator - - 246 374 1.2E-56
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 249 362 3.3E-27
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 373 536 6.8E-45
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 378 532 2.8E-40
CDD cd01949 GGDEF IPR000160 GGDEF domain 378 534 4.09549E-59
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 371 537 2.2E-49
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 76 540 4.2E-87
SMART SM00267 duf1_3 IPR000160 GGDEF domain 365 536 6.7E-54
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 375 541 3.0E-52
CDD cd00156 REC - - 252 352 5.71443E-24
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 251 362 9.6E-22
Gene3D G3DSA:3.40.50.2300 - - - 241 374 9.8E-28
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 247 378 2.56E-30
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 381 535 3.69E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.