Pseudomonas fluorescens AU13852, AA097_RS01985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCAGCCGGCGAACAGCATCAGGGTGTGCAGAGGTGTCTTGATTTCCCCCAGCACGCTGTCCACCGGAGGGCTCCAGGCCAGGCTGACGATGGCCCAGG TGCAGAACAGCAGCATGGCGATGAAGATAGGTTCGCGTAGAAGGCTTTTCAGTTCACTGGGGCGAGTACACAGGGCAATCAGCGTCGGGATGCTGAACAG TCCGTAGTACAGCTTGTGCAATCCGCTGCGTCCTGGAAGGAAGAACATCGCACAGAGAAGCAGTAGATAACCGATCGGCAGAATCCACAGGCAAATGAAA TCGAATACTCGATTGGCCGTGTTGTGAAGGGCATTGGGTTGCATGCTTGAACGTTCATCCCGGAAGTTAAGCTGGCAATCATAACGACTTATGGCTGGCG GTGTCGTTGGTCAGCTGAACAATCTCGGGCCTATGGGAGTGCCAGTACCGCGAACAAGCTGTGCTAAAGTCAGCCTCCTTTTTGACGACATTCGCGTGAT
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| DNA Sequence for Gene |
>AA097_RS01985
ATGACCGACTCCAGTCCTGACGCAAGCCCCTCGAGCTTGAAAATCTACTTCCGTCTGCTCGGCTATGTGCGGCCCTATATTGGTCTGTTTCTCATCAGCA TCGTCGGGTTCCTGATCTTCGCTTCGACTCAGCCCATGCTCGGCTACATCCTCAAGTATTTCGTCGATGGCCTGTCCAACCCGCAGGCGGTTCTGTTTCC CGGTGTGCCTTATCTGCGCGACATGCAGTTGCTGCAAGCGGTGCCGCTGCTGATCGTGCTGATCGCTGCCTGGCAAGGCCTGGGCTCCTACCTGGGCAAC TACTTCCTGGCCAAGGTATCCCTGGGGCTGGTGCACGATTTGCGGGTGCAACTGTTCAACAACCTGTTGACCCTGCCCAACCGTTATTTCGACAAGCACA ACTCCGGGCACCTGATCTCGCGTATCACCTTCAACGTGACCATGGTCACGGGGGCGGCGACGGACGCGATCAAGGTGGTGATCCGCGAAGGCATGACCGT GATCTTCCTGTTCGGCTCGCTGTTGTGGATGAACTGGCGCCTGACCCTGGTGATGATCGCCATCCTGCCGCTGATCGCGGTCATGGTTCGCACCGCCAGC AAGAAATTCCGCAAGCAAAGCAAGAAGATCCAGGTGGCCATGGGTGATGTGACCCACGTTGCCTCGGAAACCATCCAGGGCTATCGCGTGGTTCGCAGCT TTGGCGGCGAGACCTATGAGCAGCAGCGCTTTCTTGCGGCCAGCCAGGGCAACACCGACAAGCAACTGCGCATGACCCGCACCGGCGCGATCTACACCCC ACTGTTGCAACTGGTGATCTACAGCGCCATGGCGGTGCTGATGTTCCTGGTGCTGTATCTGCGCGGTGATGCTTCTGCCGGTGAAATGGTGGCCTATATC ACCATGGCCGGTCTGCTGCCCAAGCCGATCCGCCAGCTGTCCGAAGTCAGCTCAACGATCCAGAAAGGCGTGGCGGGTGCGGAGAGCATCTTCGAGCAGT TGGACGTCGAGCCTGAGGTCGATCGCGGCACCGTCGAGCGCGCCAGTATCAGCGGGCACCTGGAGGTGCGCAACCTGAGCTTCACCTACCCGGGAACCGA ACGGCAGGTGCTCGATGACATCAGCTTCAGTATCGAGCCCGGGAAAATGGTGGCGCTGGTGGGGCGTTCCGGCAGTGGCAAGTCGACCCTGGCCAACCTG ATTCCGCGGTTCTATCACCACGACAAGGGCCAGATTCTTCTGGATGGCACCGAGGTCGAAGACTTCCGCCTGCTGAACCTGCGTCGGCATATTGCTCAGG TAACCCAGCACGTGACCCTGTTCAGTGACACTGTGGCCAACAACATCGCCTACGGTGATCTGGCCGGTGCGCCGCGTGAGGACATCGAGAAGGCCGCTGC CGATGCCTATGCCATGGACTTCATTGCCCAGTTGCCCGAAGGCCTGGATACCCAGGTAGGGGAGAACGGCGTACTGCTTTCAGGTGGCCAGCGCCAGCGC CTGGCGATTGCCCGGGCCTTGCTGAAGAACGCCCCGCTGCTGATTCTCGACGAAGCCACTTCGGCCCTGGACACCGAATCCGAGCGGCACATCCAGGCCG CCCTGGACAAGGTCATGAAGGGCCGCACCACCCTGGTGATTGCCCACCGCCTGTCGACCATCGAGAAAGCCGACCTGATTCTGGTCATGGACCAGGGGCG GATTGTCGAGCGCGGCAGCCATGCCCAGTTGCTGGCACAGAACGGCTACTACTCGCGGTTGCATGCCATGGGCCTGGAAGAGCCCGCGCCCAGCGGAATC GCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGTTCCGGGGAGCGAGCCGGCTCGCTCCCCGGGGCCTTGGTGTGCAAGGCACCTTGGCATCATTTGTAGCCGCTTCCTTACAGTCTTGACCAAGCCTA AATAATTCTGTGTTTCCCGCTTGTTATGGTTCCCGCCTGAATCTTTGAACAGATCGAGGGGGCCATCCCTCTCGCGTGGGTAGCAGAATGTTGCAACGCT TTGTGTGGAAGTTATTACCCAAGACCCAGCGCAATTTCCTGCTTGGGCGCCTGTCGGTGGTGGATCGCCAAGTGGTGAACAAGTCCATGTCGGCCAATGT GCGCTTTCCTGATGCCTTCTCCCGACACTCCTGCCTGTTCATTCATGTCCCCAAGTGCGCGGGCAGCAGCATCTGTTCGGCATTGTTCGACGGTTGGATG CCCGGGCACCTGCCGTTGTACTGGTACGAGCAGCAGTTTCCGCAGGCCTTTTCCAGCAGTTTCAAGTTTGCCTTCGTGCGCGATCCCCTGGAGCGCGCTT
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| Amino Acid Sequence |
>lipid transporter ATP-binding/permease
MTDSSPDASPSSLKIYFRLLGYVRPYIGLFLISIVGFLIFASTQPMLGYILKYFVDGLSNPQAVLFPGVPYLRDMQLLQAVPLLIVLIAAWQGLGSYLGN YFLAKVSLGLVHDLRVQLFNNLLTLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFGSLLWMNWRLTLVMIAILPLIAVMVRTAS KKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYEQQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLYLRGDASAGEMVAYI TMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEVDRGTVERASISGHLEVRNLSFTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANL IPRFYHHDKGQILLDGTEVEDFRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREDIEKAAADAYAMDFIAQLPEGLDTQVGENGVLLSGGQRQR LAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLAQNGYYSRLHAMGLEEPAPSGI A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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