Pseudomonas fluorescens AU13852, AA097_RS01645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCATCAGCGCACTGGCGATGGTGCACAGGGCGGCGGCCAGCAAGGCGGCGACCATCACCGGCTTGCGACCGATGCGGTCGGAAACCGGCCCGGTGATCA GCAGCCCGATGGCCAGCATGCCGGTGGCGACCGAGAGGATCAGGCTGCTCTGGGCGGCATTGATGGAAAAGTCCCGGGACAGCAGCGGCATCATCGGCTG TACGCAATACAGCAGGGCGAAGGTGGCAAAACCGCCGGAGAACAGCGCCAGCACGGTGCGCATGAACATCGGCGTGCCTTTTTCGATATAGACCTCGTTG AGCTGGGCGACCACCTCGTCCAGGGGCGTGGCAGGGGGTTCGTGGGCGGAGGGGGCAACAGCGGCAACAGCGGATTTCACGGGGGACCTCGGGGGGAACG CAGCCGGTCAGGCAATGGAAAAAGCATATAGCTGGCTAATGATTCTTTCCAATATATTGTTCGACCTGTTTGATAGGTTTTAAGACTTAATGAGGCCCTC
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| DNA Sequence for Gene |
>AA097_RS01645
ATGGAACTGCGTCACCTGCGCTACTTCATCGCTGTCGCCGAAGAACTGCATTTTGGCCGTGCAGCCCAGGTGCTGGGCATCTCCCAACCGCCCCTGAGCC AGCAGATCCAGGCGCTGGAGCAGGAGGTGGGGGCGCGCCTGTTCGAACGCACCAATCGTCGGGTCGAGCTCAGCGAGGCCGGGCGCCTGTTCCTGGAAGA GGCGCGGCTGGTACTGGCCCAGGTGGACAAGGCGGCGGACGTGGCGCGGCGCGCGCAGCTGGGCGAGCTGGGGGAACTGAAGATCGGCTTCACCTCGTCG GCGCCCTTCAATTCGACCATTCCCCAGGCGATCTTCGCCTTTCGCCAGCGCTTTCCCGCGGTACACCTCAAGCTCAAGGAAATGAGCAGCACCCAGGTGG CCGAGGCCCTGGTGGACCAGGCGATCCAGGTCGGCATCATGCGGCCCTTGCCCCTGCCGGATTCGCTGTCGGTGGTGGAGCTGCTGCGCGAGCCGCTGGT GGCGGTGCTCAGTTCCAAGCACCCGCTGGCCAGTGGCAGTGAAGAGGGGCTGCACCTGGCGGAGCTGGCCCATGAGCCCTTTGTGTTTTTCCCCCGCAGC TATGGCAGCGGCCTGTATGCGCAGTTGCTGAGCCTGTCCCGGGATGCCGGCTTTACCCCGCATTTCGCTCAGGAGGCGGCGGAAGCCATGACCATCATCG GCCTGGTGGCGGCGGGGTTGGGGGTGTCGGTGCTGCCGGCGTCCTACCAGCGCATGCGCATCGATGGCGTGGTCTATCGCCGCCTACTGGACCCGGCGGC GATGTCGGCGGTGTGGCTGGTGCAGCGCAAGGATCAGGCTTCGCCCATGGCCAAGGCCTTTGTCGAGCTACTGACGCGCAAGACCGGGGCTACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCTGTTAGGCCGCACCGGAGCCTGCAGGTTCACCAGGTCGCCGCGCAGAGCCACTCCGGCCATCAGTACCCCGGCATGGCATTCGTAGGTGTTGAGG TCCTTGCGCACGTGGTGCTTGTAGTAGCTGACGATATTGGTCACTGCGTTGGCGCCGACCCGCTTGGCTGCGGCTTGCAGGGTGATCAGGGCCGACTGCA GGGCCCATTCGCAGGCGGCGATATCGCTCTTGTTGAAAGCGTTGGTCTTCTTGTTGGTGGTGACTTCGGTGAGCCGCACCTGGAGCACTGGCGGAAGTGG GTTGCCGGCCAGATGGAAGCTCACGCTGCCATCCAGGCGCCCGGCGCGCTCGGCGTCGGCCACGACTTTCTCGAAGGGCATGTACATCAGGTTGGTGGCC TGGCTGGCGGGGCTCAGGGTCGTTAGCAGGGCCAGGGCAATCAGTGCTTTGACTTGCATGGTCGGCTCCTTGACGGACGTGAAAGGGGCGCCACTGTCAC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEAGRLFLEEARLVLAQVDKAADVARRAQLGELGELKIGFTSS APFNSTIPQAIFAFRQRFPAVHLKLKEMSSTQVAEALVDQAIQVGIMRPLPLPDSLSVVELLREPLVAVLSSKHPLASGSEEGLHLAELAHEPFVFFPRS YGSGLYAQLLSLSRDAGFTPHFAQEAAEAMTIIGLVAAGLGVSVLPASYQRMRIDGVVYRRLLDPAAMSAVWLVQRKDQASPMAKAFVELLTRKTGATP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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