Pseudomonas fluorescens AU13852, AA097_RS24580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAGCCGATGCTCTCCAGGAACTGGCCGGCGCAAGGTCCGGCCACGCACTCTCCGCTCTCGATCAGAAACAGGGCGCCATGGGTGGCGCACTGGATCAGG CTGGCGCTGGGGTCGAGGAACTGGTCAGCCTGCCACTCCAGCGCCACCCCCCGGTGCGGGCAGCGATTGGCATAGACATAGGCCCGCTGCTCGCGCCGCA CGGCGAACAGCTTCAGCCCCGCGAGCTGGAAGCCCCGGCTGCCGGCTTCGGGCAGATCGCTGCCGGCGCAAAGAAATTTCATGGCTATCCTCTTGGTCCG AAGGCTCTGCGTCCAGGCTGTCACAGTTTCTTTCCGGCTGCAGGATGAAACATGTCGGCGCTTGACGGCTAAATGAAAACAATTATCAAATGGCCGCCCC GCCTGTTACGGGACGTTTGTTCCTTTCGATGCCCGGCTTGTCCGGCATGTCACATGGACAGCAGCTGCGCGGGCCCCACTTTGATGAAGGAAATGTACTT
DNA Sequence for Gene
>AA097_RS24580
ATGCGCCTGAGTGCCTGCGCCATTGCGTTCTGTGCCGGATTGCTGGTGAGCCAGTGGGCCACCGCTGATGAGTTGCCACAGCGGTGGGTCAGTGCCGGTG GGGCCTTGTCCGAGTGGATAACGGCTTTGGGGGCCGAGTCCAGGCTGGTGGGCGTCGATACCACCAGCCAGCACCCGGAGTCGCTCAAGGCGCTGCCGAG CATCGGCTATCAGCGTCAGTTGTCGGCCGAAGGCGTTCTCAGCCTGCGGCCGCAGATTCTGGTGGGTACCGAGGAGATGGGGCCGCCGCCAGTGCTTTCG CAGATCCGCAGTGCCGGGGTCAAGGTCGAACTGTTTTCCGCCCAGGCCGACTTGCCGACTTTGCAAGCTACCCTGCAGCACCTGGGCCTGTTGCTGGGCC GAGAAGAGCAGGCCGGGCAACTGTTCCAGGGCTATCAGCAACAACTTGGGCGGCAGCAGGCCTGGGTCACCCAGGCTCAAGCGCAGCACGCTGCGCCCGG GGTGCTGTTGTTGCTCGGGCATGCCGGCGGCAAACCCCTGATCGCCGGCAAGGACACCGCCGCGAATTGGCTATTGCAACAGGCCGGCGGGCGCAACCTG GCGACTCATACCGGCTATAAGCCGTTCTCGGTCGAATCCCTGGCGGGCTTGAATCCGGATGTGCTGGTGTTCTCCGACCGCAGCCTGACCGGCGATGCCG CTCGTGCCGCACTGTTCAAGGAGAACCCGGTGCTGGCATCCACACCGGCGGCCAAGGCCGGGCGGGTGGTGGAACTGGACCCGACCTTGCTGGTGGGAGG CCTGGGCCCTCGCTTGCCTGATAGCCTGAAACGCCTGTCCAGCGCCTTTTATCCCCAGGCCAAGCCGGCCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGTCAGGTCAAGCCTCGAACACTATTTATCGGGCTGGGTGTGCTGTGCCTTGTGGCGATCTGGCTGTCCCTGGCCCTGGGGCCTGTCAGCCTGCCCTT GTTTGATACCTTGCGTGCCGCCTTGCGCCTGCTTGGATTGCCGATCGACGGGCAGGGGCTGGAGCAGGCGGAACTGATCCTGGGACAGATTCGCTTGCCT CGGACTCTGCTCGGTCTTGCGGTGGGCGGAGTTCTGGCGCTGTCCGGGGTCGCCATGCAGGGGCTGTTTCGCAACCCCCTGGCGGACCCGGGGTTGGTGG GGGTTTCCAGTGGTGCAGCATTGGGTGCGGCCATCGCCATTGTTGGCGGCTCGATGTTCGGCGGCCTGCCAGAGGCTGTTGGCCCTTATTTGCTCTCCCT GTGTGCCTTCCTTGGCGGCCTGGGGGTGACGGCGCTGGTGTATCGCCTGGGGCGGCGCAACGGGCAGACCCATGTGGCAACCATGCTGCTGGCGGGGATT
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLSACAIAFCAGLLVSQWATADELPQRWVSAGGALSEWITALGAESRLVGVDTTSQHPESLKALPSIGYQRQLSAEGVLSLRPQILVGTEEMGPPPVLS QIRSAGVKVELFSAQADLPTLQATLQHLGLLLGREEQAGQLFQGYQQQLGRQQAWVTQAQAQHAAPGVLLLLGHAGGKPLIAGKDTAANWLLQQAGGRNL ATHTGYKPFSVESLAGLNPDVLVFSDRSLTGDAARAALFKENPVLASTPAAKAGRVVELDPTLLVGGLGPRLPDSLKRLSSAFYPQAKPAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site