Pseudomonas fluorescens AU13852, AA097_RS07765 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU13852 Contig_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTCCTGCAAGCGCTGCTGGCCGAACAGGTGCCGGTACGCGACATCCGCAGCATTGCCGAAGCCATCGCCAACAATGCCGCCAAGAGTCAAGATACTG CCGCTTTGGTTGCCGCGGTACGCGTCGGATTGTCTCGTGCCATCGTCCAAAGCATTGTAGGTACTGAGTCTGAGCTGCCTGTGATCACCTTGGAGCCAAG GTTGGAACAAATTTTGCTCAGCAGTCTGCAGAAGGCAGGACAAGGCCAGGAAGAAGGCGTTCTGCTGGAGCCAAGCATGGCAGAGAAGCTGCAGCGTTCG CTGATCGATGCGGCGCAGCGTCAAGAGATGCAAGGTCAACCGGTGATTCTGTTGGTAGCGGGTCCGGTCCGCGCCATGCTCTCGCGGTTCGGCCGTCTCG CCGTCCCGGGTTTGCATGTGCTGGCGTACCAGGAAATTCCGGACAACAAGCAAGTGACCATCGTTGCGACAGTAGGGCCCAACGGCTGAGGTAGTGGGTT
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| DNA Sequence for Gene |
>AA097_RS07765
|flhF
ATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTTCGTGATGAGTTGGGCGCTGAAGCCGCCATCATCGGCAACCGGCGGA TCGCCGGGGGTGTCGAGCTGACGGCTGCGCTGGATTACAAGTTGTCGGCCTTGTCGCCACGGGTTCCGAACATGGAACTCGAGGACGAGTTGCGCAAGAC CCAGTCGCGGATTGTCACCGCCCAGGCCGAACTGAGCCTGCGGGGCGAGGGCGACAGTGCCTCGATCACCAATCGCCAGCTGTTCGCCGGCCTGCCGTTG ACCGCGGCCGAACCCTTGATCGAGCCGACCCTGACCGAGCGTCCGCGCCCGGCGCCGGCTCCTGCAGCGCCAGCAGCCGATACGCGGGCGCTGGACTCGA TGCGTTTCGAGCTCAACGGCTTGCGTGAGCTGCTGGAAGTGCAGCTCGGCTCCCTGGCCTGGAGCCAGTTGCAGGGCAGCCGTCCGGAACAGGCCAACCT CTGGCGTCGCCTGCAGCGCATCGGTCTGTCGGGCCCGCTGGCCCGCGACCTGCTGGCACTGATTACCGAAATCAACGAACCCCGTCAGGCCTGGCGCATG TTGCTGGCGCACCTGGCGCGGATGATCCAGACCCCGGAAGTCGAGCCTCTGGAAGAGGGCGGCGTGATCGCCATGGTCGGTCCGGCCGGCATGGGCAAGA CCACCACCCTGGCCAAGCTGGCGGCGCGCTACGTGCTCAAGTACGGGGCGCAGAACATTGCCCTGGTGAGCATGGACAGCTACCGCATCGGCGCCCAGGA GCAGCTCAAGACCCTGGGGCGCATCCTCAATGTCTCGGTGACCCATGTGGACCCGGGCCAGTCCCTGGCCCAGGCGCTGGATCCGCTGCTGCGCAAGCGC GTGGTGCTGATCGATACCGCCGGCCTTCAGGCCAGCGATCCGGCGTTGCGCATGCAACTGGAGAGCCTGGCCGGTCGGGGCATTCGTGCGAAGAACTATC TGGTACTGGCCACCACCAGCCAGAAGCAAGTGCTGACCGCGGCCTACCACAGCTACAAACGCTGCGGCCTGGCCGGTTGCATCCTGACTAAACTGGATGA AACAGCCAGTCTTGGCGAGGTGTTGAGCCTGGCCATCAGTCATGAACTGCCGGTTGCCTATCTTACCGATGGTCCGCGGATTCCTGATGATCTGCACCTG CCTCGCCGGCATCAGCTGGTGAGTCGCGCGGTAAGCGTACAGATGCAGGAAGAACCCAGCGAGGAAGCCATGGCCGACATGTTCGCTGACCTTTACCACA GCCCGTCCAAACGGGTTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAATCATGAATAGATTGCAGTGTATCTACATCGATGGTCTGCCATGCATTGTTCCAATGGTGAACGCGCAGCCAGTTATGTGGCCCCGTCTAAGTAAG ACAAGGTAAAGAAAGAACATGGGCAGCATGCATCCCGTACAGGTGATTGCGGTGACCGGCGGCAAAGGTGGCGTCGGCAAGACTAATGTGTCAGTGAACT TGTCCCTGGCTCTGGCTGAGCTCGGCCGGCGGGTCTTGCTGCTGGATGCCGACCTGGGACTGGCCAATGTCGATGTCCTGCTGGGCCTGACGCCCAAACG CACCCTGGCCGACGTCATCGAGGGCCGTTGCGAGTTGCGCGATGTGCTGCTCCAGGGCCCTGGAGGCATCCGTATCGTACCGGCCGCCTCGGGCACCCAG AGCATGGTGCACCTGAGCCCCGCGCAGCACGCCGGCCTGATCCAGGCCTTCAGCGATATCGGCGACAATCTCGATGTGCTGGTGATCGACACCGCTGCGG
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGAEAAIIGNRRIAGGVELTAALDYKLSALSPRVPNMELEDELRKTQSRIVTAQAELSLRGEGDSASITNRQLFAGLPL TAAEPLIEPTLTERPRPAPAPAAPAADTRALDSMRFELNGLRELLEVQLGSLAWSQLQGSRPEQANLWRRLQRIGLSGPLARDLLALITEINEPRQAWRM LLAHLARMIQTPEVEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSYRIGAQEQLKTLGRILNVSVTHVDPGQSLAQALDPLLRKR VVLIDTAGLQASDPALRMQLESLAGRGIRAKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHL PRRHQLVSRAVSVQMQEEPSEEAMADMFADLYHSPSKRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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