Pseudomonas fluorescens AU13852, AA097_RS07730 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU13852 Contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTCGAGTACATAAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGTCCCAGCGAAGCCATTGTGGTGTCGACTTTCCACATCGAACTCGATGGT GGCGGCGGCGACCTGCACGTAACCATGCCGTATTCGATGATCGAGCCGATCCGCGAAATGCTCGACGCCGGCTTCCAGTCCGACCTGGACGACCAGGACG AACGCTGGAGCAAGGCTCTGCGCGAGGACGTGCTGGATGTGGCCGTGCCGCTGAGCGCCACTGTCGCCCGTCGTCAGTTGCGCCTGCGGGACATCCTGCA CATGCAGCCTGGCGATGTGATCCCGGTGGAGCTGCCCGAAGACATGATCATGCGCGCCAATGGCGTGCCGTCGTTCAAGGTCAAGCTGGGTTCCCACAAG GGCAACCTGGCGCTGCAAGTGATCGAGCCGATCGAGCGCCGTTGAGCGGCGCTCCAACCTGTTTGCTGTTCAATGAATTTTTGCCCGTCGAGGACCCATG
DNA Sequence for Gene
>AA097_RS07730 |fliN
ATGGCTGACGAAATTAACTCCCAGGACGACCAGGCGCTGGCCGACGAGTGGGCTGCTGCGCTGGAAGAAACCGGTGATGCCGGTCAAGCGGATATCGATG CCCTGCTGGCGGCGGACGCCGGCGCCGCGTCAAGTTCCGGGCGCTTGCAGATGGAAGAGTTCGGCAGCGTGCCGAAAAGCCATGAACCGGTCACCCTGGA CGGCCCTAACCTGGACGTGATTCTGGATATCCCGGTCTCGATCTCCATGGAAGTGGGCAGCACCGATATCAACATTCGCAACCTGCTGCAGCTCAACCAG GGCTCGGTGATCGAGCTTGATCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCACCCTGATCGCCCATGGCGAGGTGGTTGTGGTCAACGAAA AGTTCGGCATTCGCCTGACTGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAACAAGCTGCTTGGCATTGCATTCGCGCTGCCCCTGAGCGCCCTGGCCGCGGAACCGGCGGCCACCGCTGCGGTGGCTGCGGCCGCGCCCGTGACCG GCAGTGTCAGCGGCCAGTTGACCCAGCTGGTACTGGGCCTGTTGCTGGTGATCGGCGTGATCTTCTTCCTGGCCTGGCTGTTGCGCCGGGTGCAGCAGGC CGGTCCTGCCGGCAAGGGGCAGGTGATCGAACTGATCGGCTCCCGGGCGCTGGGCCCGCGCGATCGCCTGGTGCTGGTGCAGGTTGGCAACGAGCAGATC CTGCTGGGCCTGACCCCGGGCACCATCACCCCGTTGCATGTACTCAAAGAGCCGGTGCAGGTGCCCAGTGCCGAGCAGGCGACGCCCGAGTTCGCCCAGC GCCTGATGGAGCTGTTGGGCAAGGATCAGAAGGATAAGAAGTAATGCCGTTGCGCATCATCTTGACGTTGGCACTGATGCTGGCGGCGCCGCTGGCGTTG
Amino Acid Sequence
>flagellar motor switch protein
MADEINSQDDQALADEWAAALEETGDAGQADIDALLAADAGAASSSGRLQMEEFGSVPKSHEPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQ GSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site