Strain | Pseudomonas fluorescens strain AU11136 Contig_58, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTCAACGCGTCGGCGTTGGTGCGCGGCCCGGTCTTCAGGGGAATTGATCGCTGGGGCAATCTGGGCGAAGCGGGCTTGCACGCCAACAGTGTGATTCCC TTGTTACGTCAAGCCTTTGAGCGCGCGGGGATTCCCGCCGAGCAGTACACCAGCCATTCATTGCGTCGCGGTTTTGCAACCTGGGCGCATCACAATGGCT GGGACCTTAAGTCCCTGATGAATTACGTCGGCTGGAAGGACGTCAAGTCTGCGATGCGCTATGTTGAAGCGACCCCGTTTACCGGGATGAGCATTGCGGC AGAAAAACGTATCGGGCCTTGATCGGGATCAAGATGCGGGTGAGCGGGCTGGCAGAGAGTGGTATTCGGGTTTCTTCTATTAATAGAGCAACCTGATAGC CAAAACCAATCACCAGCATCAGCTTTCCCAATGAGCCAGATACAAAATGTGTTGTTAGGATTCACCCCATCAACTTTTCAACCCTGACGGAGAGTCAACG
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DNA Sequence for Gene |
>AA055_RS07870
ATGCCTATCATCAATAGCCAAGTAAAACCGTTCAAAGCCACCGCTTACAAAAACGGCAGCTTCGTAGAAGTGTCGGACGCCGACCTGAAAGGCAAATGGT CCGTTGTGTTCTTCTACCCGGCTGACTTCACCTTCGTTTGCCCAACCGAGCTGGAAGACCTGGCTGACAACTACGAAGAGTTCAAGAAACTCGGCGTGGA AATTTACAGCGTGTCTACTGACACCCATTTCGCTCACGCGGCATGGCACAACACCTCGCCAGCCATTGGCAAAATCCAGTACACCATGATCGGCGACCCG ACGCTGACCATCTCTCGCAACTTCGACGTACTGATCGAAGAAGCAGGCCTGGCGGATCGCGGCACGTTCGTGATCAACCCTGAAGGTCAGATCAAGATCG TTGAACTGAACGACGGCGGCGTTGGCCGTGATGCTTCCGAACTGCTGCGCAAAATCAAAGCGGCTCAGTACGTGGCTGCCCACCCGGGTGAAGTGTGCCC GGCCAAATGGAAAGAAGGTGAGTCCACCCTCGCACCATCGCTCGACCTGGTCGGCAAGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGTGAGCCAGCCAAGGGCGGTGATCCGCACCTGAGTTGTCAGCAGCATCGCCCTCAAAACGCCCGGGCGAGATTCGCTCGGGCGTTTTTTTTACACA GTCTTAAACCGTTAAGGAGATCGCCCGTATGTTGGACGCCAATTTAAAAGCTCAGTTGAAGTCATACCTGGAGCGGGTCACCCAGCCGATCGAGATCGTT GCTTCCCTCGACGACGGTGCGAAATCCCGTGAAATGCATGACTTGTTGAAAGAAATCGCCAGCCTTTCCAGCCAGATCACCTTGCTGGACAACGGCACCG ATGCGCGCAAGCCATCGTTCTCGTTGAATCGCCCGGGCGGTGATATCAGCCTGCGTTTTGCAGGCATCCCCATGGGCCACGAATTTACATCGCTGGTGCT GGCATTGCTGCAAGTAGGCGGCCACCCATCGAAAGCCAGTCCCGAAGTGATCGAGCAAATCCGTTCATTGAAAGGTGAGTTCAACTTCGAGACGTACTTC
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Amino Acid Sequence |
>alkyl hydroperoxide reductase subunit C
MPIINSQVKPFKATAYKNGSFVEVSDADLKGKWSVVFFYPADFTFVCPTELEDLADNYEEFKKLGVEIYSVSTDTHFAHAAWHNTSPAIGKIQYTMIGDP TLTISRNFDVLIEEAGLADRGTFVINPEGQIKIVELNDGGVGRDASELLRKIKAAQYVAAHPGEVCPAKWKEGESTLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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