Pseudomonas fluorescens AU11136, AA055_RS21725

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11136 Contig_51, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGGACGAGTTGCTCAATGCAATCAAGGCGCACGTGCCCGGTTTCACGGTTGTGCAAAACGCTCACTGATGCTCGGTCAACAGGCCGATCACCTTATAA ATGGGGAACACCATGGCTCGCATTCTGATCGTCGATGACTCGCCGACTGAAATGTACAAACTGACCGGCATGCTCGAAAAGCACGGCCATCAAGTGTTGC AGGCGGGCAACGGCGCAGATGGCGTCGCACTGGCGCGCAAGGAAAAACCCGATCTGGTCCTGATGGACATCGTGATGCCGGGCCTCAACGGGTTCCAGGC CACGCGTCAATTGACCAAAGACCCGGAAACCCAAGGGATCCCGGTCATTGTGGTGACCACCAAGGATCAAGAGACCGACATGGTCTGGGCCGCTCGACAG GGGGCAAAAGCGTATTTGACCAAACCGGTCGAAGAGGATGCGCTGACCGAGGGAATCAATAAATTTCTGCCAGCCTCCACGCACAAGTGATGGCCGCACC
DNA Sequence for Gene
>AA055_RS21725
ATGCCCGATTCTCTGACCGCGTTTGAGCTGCTGCTCGACATTGACCAGCGCTGTCGCTCGCTGGCGGCGGGGCCTGTAGCCGAGCCCGCCGCGGCGCACA CCTGGAGCGGTATTGGTTTTCGCATCGGCGAGCAGTGTTTTGTGGCGCCTATGGGGGAAATCGCCGAGATCCTGCATGAGCCGCGTTTCACCTTGCTGCC GGGTGTCAAACCCTGGGTCAGAGGCGTCGCCAACCTGCGTGGGCAACTGCTGCCGATCATGGACTTGTGCGGCTTTTTCGGCGTCGAGTTATCCCCGTTG CGCAAACAGCGCCGGGTGTTGGTGCTGGAGTACGACGACATCTTCGTCGGCCTGCAAGTCGATGAAGTGCTGGGCATGCAGCACTTTGCCCAAACGGATC TGGACACCCACCCACCCGTTTCCCCCGGCTTACCTTTCGCGCCTTATGTACAAGGACGCTTCGCTGCCGCCCATGACTGGTGGGTATTCAGCCCGTTTGC CTTGGCGCAAGCGCCCGAGTTCCGGGCGGTCGCGGTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGTGAGCACGTGGAACCTCAAGCATCCATACAGCAGTCAGGGCCTGATCGATGACCGCAGCCAACAACGCTAAACCAATGGAAGGGTCGCGCAGCCGT TCGCAGATCATCGTGCTGTTTATCGCCCTGATCGTGTTCATCATGCTGTTGTTCGCCAATTTTGCTTACCTCAACACCCAGTCCAACTACGACAAGCAAT ACATCAGCCACGCGGGCGAGCTGCGCGTGCTGTCCCAGCGCATTGCCAAAAACGCCACTGAAGCCGCTGCCGGTAAAACCGCAGCGTTCCGCCTGCTGAG CGATGCGCGCAACGACTTCAGCCAGCGCTGGGGTTACTTGAAAAAAGGCGACCCGGCCACCGGCCTGCCCGCCGCGCCACCCGCCGTGCACAAAGAAATG CAGGCCGTTCAGCGCGACTGGGAACAGTTGCTGAGCAACACCAACGCCATTTTGGCCAGTGAACAAACCGTGCTCTCGCTGCACCAAGTGGCGGCAACGC
Amino Acid Sequence
>protein PilI
MPDSLTAFELLLDIDQRCRSLAAGPVAEPAAAHTWSGIGFRIGEQCFVAPMGEIAEILHEPRFTLLPGVKPWVRGVANLRGQLLPIMDLCGFFGVELSPL RKQRRVLVLEYDDIFVGLQVDEVLGMQHFAQTDLDTHPPVSPGLPFAPYVQGRFAAAHDWWVFSPFALAQAPEFRAVAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site