Pseudomonas fluorescens AU11136, AA055_RS16165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11136 Contig_22, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGACATTTCAAGGCTGAGCCAGATGCCTTGGCTGTCTTCGTGGCAGTCAAGGCCGGTTAGAAATTGCCCGGCGCAAGGCCCGGCCACGCACTCGCCGGA CTCGATCAAGAACAGGGCCGCGTGGGTGGCGCATTTAATCAGGCTGGTGCTGTCGTCAAGAAACTGGTCGGGCTGCCACTCCAGGCGGACACCCCGGTGC GGGCAGCGGTTTTTGTAGGCATAGACCCGGCCCTCACGTCGCACGACAAGCACGTCTGATTCGTCTATTTGAAAACCGCGACTGTTGCCTTCTTTCAAGT CCTCAGAGGGGCATAACCACTTCATGGCAATCCTTAATGGCTGCTGATACTCGCGTAGATGACGCGGGTGACAGGGTGTTTATAGGTTGACGTGCAAATG CAAACAATTATCAAATGGCTGGCTGCTCCGCGATCTGCTGTGTCCACGGCGCGGGATTTTACTGTTCCCGCTGACCCACTTATTAAAGGAACGCCTTTGT
DNA Sequence for Gene
>AA055_RS16165
ATGCGCTTGCGTCTTCGCCTGATTACGCTCTTTGCTGGCCTTGTGATCAGTACTGTCAGCTCGGCTGCCGAGTTGCCACACCGTTGGGTCAGTGCCGGTG GGGCACTCTCGGAATGGGTCTGCGCGCTGGGGGCGGAGTCTAAATTGGTTGGGGTCGATACCACTAGCCAACATCCTGAATCACTTAAATCCCTGCCCAG CATCGGCTATCAGCGTCAGCTGTCGGCAGAGGGCATCCTGAGCCTCAGGCCTGATGTGTTGATCGGCACGCAAGAGATGGGGCCCGCCAAGGTCTTGAAG CAGATTCAAGCGGCCGGGGTGCCGGTTGAAATGTTCTCGGCGCAGGCTGATCTGACGACCCTGCAAGCGACGCTGACGCATTTAGGGCGATTACTTGGCG ATACAGCGCACGCCAAGGACGTGTTTGACCGTTTTAAGCAGCAAATGGATCAGCAGCAGGCTCAGGTCAAGCACTTGCAAGCAACGCACAAAACGCCGGG CGTCCTGTTGTTGCTGGGTCATGCGGGTGGCAAACCGATGATTGCCGGTAAGGACACCGCTGCCGATTGGTTGCTGACGCAAGCCGGCGGCCGAAACCTT GCCACCCATTCAGGCTACAAGCCTTTCTCGGTCGAGGCGTTGGCGGGGCTGAACCCGGAGGTTCTGGTGTTTGCAGATCGCAGTCTGAGCGGTGAGGCCG CCCGTACAGCCCTGTTGAAAGAAAACCCGGTGCTGGCATCGATTCGCGCAGTCAAAGCAGGGCGGCTCTATGAAGTGGACCCAACCTTGTTGGTCGGCGG GCTGGGGCCGCGGTTGCCGGAGCGTCTCAAGCAACTCACGGTTGAGTTTTATCCCGAGGCCGCAGCCGCTCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAACGCTGGTAAAGCCCCGTTCTTTGTTTATTGGTTTGACCCTCTTGTGCCTGCTGGCGACCTGGTTGTCGCTGGCGCTTGGGCCAGTGAGTTTGCCGCT GTTCGATACGTTGCGCGCAGCCATGCGGTTGATGGGGTTGTCGGTACAGGGGGAAGGTCTTGAACAGGCAGAGTTGATTCTCGGGCAGATCCGCTTGCCG CGAACCTTGCTTGGGCTGGCGGTCGGCGGTGTTCTGGCGCTGTCGGGCGTTGCGATGCAGGGCTTGTTCCGCAACCCGTTGGCCGACCCCGGTCTGGTCG GGGTCTCCAGCGGTGCAGCCCTCGGAGCGGCGATTGCCATCGTAGGCGGCGCTGCCTTGGGTGGGTTGCCTGACTTCATCGGGCCGTACTTGCTGTCGCT CTGTGCGTTTTTGGGGGGCTTGGGAGTCACTGCGCTGGTTTACCGACTGGGGCGGCGAAACGGCCAAACCCATGTGGCCGTGATGTTGCTGGCGGGGATC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLRLRLITLFAGLVISTVSSAAELPHRWVSAGGALSEWVCALGAESKLVGVDTTSQHPESLKSLPSIGYQRQLSAEGILSLRPDVLIGTQEMGPAKVLK QIQAAGVPVEMFSAQADLTTLQATLTHLGRLLGDTAHAKDVFDRFKQQMDQQQAQVKHLQATHKTPGVLLLLGHAGGKPMIAGKDTAADWLLTQAGGRNL ATHSGYKPFSVEALAGLNPEVLVFADRSLSGEAARTALLKENPVLASIRAVKAGRLYEVDPTLLVGGLGPRLPERLKQLTVEFYPEAAAAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site