Pseudomonas fluorescens AU11136, AA055_RS18170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11136 Contig_20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTGTGGTTGGGCGGGCGAATCGCGCCTGCTGCTGTTTATCACCCTGGAGGCGCGGCGGGTCACGGTGCCGGTGTTGCATCAAGCACTGCGCACGCTG ATCGCCGTGCGTGAAGAAGTGCTGGCCCCGTGAGTCGCATCAGCGGCCTGCATATCGGGATCGAGCACCTCAGCGAAGTCGACAGCGCCCATGACCTGGC CGGGCTGCCCGAGCGCTATGTGTTGCCGCCGGACGGCCACAGTGTGGAGGCGCATTTCGATGCCTTGTACCCGGCCCGTCGTGCCGAACAGCAATGGCTG GATCTGGCACGCCCCTCCCGGCATTTTCACGAACTGCTGCGCCCCCAGGCGTTTCGCCAGGCCCTCGCCCAATTACGCCAGACCCTGGAAGCGTCGCCGG ACCCTCACCTGCACGCGGCGGCACAGCTGATTGCCGCGCGCAGTGACGACGAGCAACTGCTGCACGTGGCGCTGAATTTGTTGCACAAGGTATGAGTGAC
DNA Sequence for Gene
>AA055_RS18170
ATGAGCTTGAAACCGGTTGAGCAAACCCTGCTGTTGCTGCTCGGATGGGTGCAACTGCAATGCGCCCAACCGGGCCGCGCCCGCACGTTTTTTGAAGCCC TGCTCAGTGCAGAACCCCGCCAACGCGACGCGCGCAAGGCGCTGGTGGTGGCATTGCTGCAACTGGACCTGGGCGCCCAGGCCCAACAGCACTGTGAGCA ATTGCTGGCCGACGGCGAACAGGACCCGGCACTCTGGGCCTGCCTGAGCCGTGCGCGCCAGCTGCAAGGCCAACTGGAACAGGCCCGCGCCGATTACGAG CACTTCCTTGCCCTGCGGGATACCCATGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACTCACGGAGTTTCTGACCCGCCTCGGCGCCCGTAAAGACATCATGCTGGCAATCATGCTGCTGGCGGTGGTGTTCATGATGGTGTTGCCGCTGCCGCCG TTTTTGCTGGACATCCTGATCGCGATGAACATCACCATTTCGGTGGTGCTGATGATGATGTCGGTCTACATAAACTCGCCCTTGCAGTTCTCGGTGTTCC CCGCAGTGCTGCTGATTACCACGCTGTTCCGGCTGGCGCTGTCGGTCAGCACCACGCGGATGATCCTGCTCGAAGCGGACGCCGGGAAGATCGTCGAAAC CTTTGGCAACTTCGTGGTCGGCGGCAACCTCGTGGTGGGCTGCATTCTGTTTTTGATCATCACCATCGTGCAGTTTCTGGTTATAACCAAAGGCGCGGAA CGCGTGGCCGAAGTGAGCGCACGCTTCTCGCTGGACGCCATGCCCGGTAAGCAAATGAGCATCGACGGCGACATGCGCGCCGGGGTCATCGACGTCAACG
Amino Acid Sequence
>type III secretion protein
MSLKPVEQTLLLLLGWVQLQCAQPGRARTFFEALLSAEPRQRDARKALVVALLQLDLGAQAQQHCEQLLADGEQDPALWACLSRARQLQGQLEQARADYE HFLALRDTHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site