Strain | Pseudomonas fluorescens strain AU11136 Contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCAATGGCGAAGCGTTATTCAGCGGTCTTTATCTCAATGAATTGTTAGTGCGCTTGCTACCGGCTGAAGACCCGCACCCCGCGGTCTTTGATCACTACG CAGCCACCCTCCTGGCGTTGGCCGAAGGTCGACCGCTGGAACCTCTGCTACGGGCCTTCGAATGGCGCTTGCTGGATGATTTGGGGTACGGGTTTTCGCT TTCTCGGGACATTCAGGGTGAGCCGATAGCCAGTGACGGCATGTACCGTTTGCAGGTCGATGCCGGGCTGGAGCGCATTTATCTGGTACAGCCGGGGTTG TTTCACGGCGCTGAGCTACAGGCCATGGCCGAGGCTGACTGGACCACCGCGGGTGCGTTGTCGGCGGCCAAGCGTTTGATGCGCCAGGCATTGGCGGTTC ACTTGGCGGGCAAGCCCCTGGCCAGTCGTGAGTTGTTTCGCAAGCCCTGAATAGACCGGTATGCTGTGCGCCGAATCTTCAACTCTTCAGGAGAGCCCTC
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DNA Sequence for Gene |
>AA055_RS15485
GTGACCCAAAGCAATCGCATCCTTCTCGGCGTGAATATCGACCACGTAGCCACGCTGCGTCAGGCTCGGGGCACGCGTTACCCTGATCCGGTCAAGGCCG CGCTGGACGCTGAAGAGGCGGGCGCCGATGGCATCACCGTGCACTTGCGTGAAGACCGCCGCCACATTCAAGAGCGCGACGTGTTGTTGCTCAAGGATGT GCTGCAAACCCGCATGAATTTCGAGATGGGCGTGACCGAAGAAATGATGGCGTTTGCCGAGCGCATTCGTCCGGCGCACATCTGTCTGGTGCCTGAAACC CGTCAGGAACTGACCACGGAGGGTGGGTTGGACGTGGCGGGGCAGGAAGCCCGGATTAAATCAGCGGTTGAGCGCTTGAGCCGGATTGGCTGTGAAGTGT CGCTGTTCATCGATGCCGATGAGCGTCAGATCGAGGCATCGAAGCGAGTCGGTGCGCCGGCGATTGAATTGCACACCGGTCGTTATGCCGATGCGCAAAC CCCCGCCGAGGTGGCGCAAGAACTGCAACGGGTAGCGCAAGGCGTGGCCTGTGGTCTGGCTCAAGGGCTGATCGTCAATGCCGGGCATGGCCTGCATTAC CACAACGTTGAGGCCGTGGCCGCCATCAAAGGCATCAATGAGCTGAACATCGGTCATGCGTTGGTGGCGCATGCCCTGTTCGTAGGCTTCAAGTCGGCCG TCTCGGAAATGAAAGCGTTGATTGTGGCAGCCGCCAGGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGCATTTACGCTTTCAAGCGGCGCAAACTGCGCGGTGCGGGTGCGACAGGCACTTGATCGCCGGATAAGCCGCCTCGAACCGCAGCAGCAATGAAGAGC CGCCGCTACAGCTGGGGTTCTTCTTTGGGCTTGGTCTTGTCGATGCCGGGAATGTGCAGCTTGCTGTCAGCCGCCTGGTCGCCTTCAAGCTGCGGCTGCG TGGCCCATGTCAGGATGTCGTAGTAACGACGGATGTTGGCCACAAAGTGCACGGGCTCGCCGCCGCGGGCGTAGCCATAACGGGTTTTGCTGTACCACTG CTTCTGCGCAAGGCGGGGCAGCATCTTTTTGACGTCCAGCCACTTGTTCGGGTTCAGGCCTTCTTTCTTGGCCAGTTTGCGTGCGTCTTCCAGATGCCCG CCGCCGACGTTGTAGGCTGCCAGGGCAAACCAGGTACGATCTGGCTCCTGGATGTCGTCGTCCAGCTCGCTTTTGATCAGCGCCAGGTACTTAGCGCCGC
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTQSNRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMMAFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKSAVERLSRIGCEVSLFIDADERQIEASKRVGAPAIELHTGRYADAQTPAEVAQELQRVAQGVACGLAQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKSAVSEMKALIVAAARH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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