Strain | Pseudomonas fluorescens strain AU11136 Contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCCCGTTGTGCCCAGACGCCCATCATCATGCTCACTGCCAGCTCCGACGAAACCGACCGCGTGTTGGGGTTGGAGCTGGGGGCCGACGACTACCTGGGC AAACCGTTCAGCCCCCGTGAATTGCAGGCAAGGATTAAAGCGCTGCTGCGGCGTGTGCAATTTGCCAGTGCCGGTGCCGGTCACGAAATCATGGCCTTTG AAGGATGGCGCCTGAACACCGTGACCCATCGCCTGTTTCACACCGACGGCGAAGAAGTCATCCTCTCGGGGGCCGACTTTGCCTTGCTCAAATTGTTTCT CGATCACCCGCAACAAATTCTGGACCGTGACACCATCGGCAATGCCACCCGTGGCCGCGACCTGATGCCGTTGGACCGCATCGTCGACATGGCGGTCAGT CGCTTGCGCCAGCGCCTGCGCGATACCGAAAAGCCCCCGCGACTGATCCGCACCATTCGCGGCAGCGGCTATCAGTTGGCCGCCGAGGTCACGACAGGTC
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DNA Sequence for Gene |
>AA055_RS14665
ATGGCCATTAAGTACTGGCGCCGGCCGCGGGTGCCCCGCTCATTGCTCGGCCGCATGTTGTTGCTCACCTTGATCGCCATCTTGCTGGCGCAAACCTTGT CCAGCGTGATCTGGCTGTCGCAACTGCGGGCCACGCAACTGCAAGGACTTGTCACCAGTGCGCGCAGCCTGGCGCATTCGATGAACGCCACCGTCACCTA CATGAAGTCATTGCCGTTGGCATACCGGCCGCTGGTGCTGGACCAGATGCGCAGCATGGGCGGCACGCGCTTTGTCGTCAGCCTCAATGAGCGGCCCCTG GACATGCGCGCGTTGCCACTGACCCAGCGCAAACAGGCTGTGCTTGAGGCCGTGGACCAAGTGCTGCGCCAATCCCTGGGCCCTGCTGTCGACCTGTCGG TGAAGTTTGTCAGCCCGCAAGACCTGCGGATCTTCAACGCCGGGCTGACGCTCGATGAGCTGCCGCGCTCTTGGGCGCACTTTGCCCTGACCCTGGAACC GGTCAACCCACCGGTGCTGGTGACGCAAATCCAGATGTCCCCCGGCGAGTGGCTCTATATCGCTTCCCTGTTGCCCCAGCCCTATACCAGCCTTGAGGAA GAAGGCCTGCCCGCGATGCAGTTATGGTTTATTGCGCTGAGCAGCGGGTTTTTATTGCTCTCCATCGGTGTGCTGGTGCACTGGCAAAGTCGGCCCCTTA AGCGTCTGGCCCGTGCAGCGCGGGATTTGTCACTGGGCGAGGAGCAAGTCGAGCCAGTCGAAATCGGGGGCGGCAGTGAGGTGGCTGAGGTCGGGCGAGC GTTTAATACCATGCGGGTGCGCATCAGCCGTTACCTCACCGAGCGCAGCCAGTTGTTCAGCGCGATTTCCCACGACCTGCGAACCCCGATTACCCGTTTG CGCTTGCGCGTCGAGCTACTGGAAGACGAAGCGTTGCAGCACAAATTCGGGCGAGATCTGGATGAGCTTGAACTGCTGGTCAAAGGCGCCTTGCAGTGTG TGAAAGACACGGACATCCACGAAAACATTGAGCCGGTGAACCTGAACCTGTTGCTCGAATGTTTAATCGAGCCCTATTTGCTGCCCCACGGCAATGGCCG CGTGACGGTGACCGGGCGGGCGTCGAGGCCCTTTTCTGGCAAGCCCCTGGCCTTGCGCCGGTGCATGGGCAACCTGATCGACAATGCGCTCAAATACGGC AAGCACGCGCACCTGGTGATTGAAGACCACGCGCACGCGTTCGTGTTGCATGTCGACGATGACGGCCCCGGGGTTCCCGAACAGCGACTGGAGCAAGTGT TCGAGCCGCATTTCCGGTTGTCAGGGCATCAGCAAGGCTATGGCTTGGGGTTGGGCATTGCCCGCAACATTGCCCATAGCCATGGCGGAGAAGTCAGCTT GCAAAACGTGCGCGGCGGTGGCCTGCGGGTCACGTTGTCAGTACCGCGAACAGCGGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCGGCCCCGGCGCTTGCCCGGCGCACCCTGCAACAGCAACCACACAGGCCTGTGGCTCACTTGCCGCTTGCCGCCAGATGCCGACTGATGGACAGGCTT GCCTGTTCTGGCGTGATGGGCAGTACGGGCTCCAGGCACGAACTGGCCGCGGACTCGGTTTCGGGTTCTTGAGCCTTTTTATTCATGGCCGCCTTGATGC GATTTTCGCGAATGCGGGCGCTGGTTTGACTGAAGTGCTGCTGCAGTTTTTCCATGGCCACGTCGTAAGGTTCGTTACACAGGGTTAACTGCCGCTCGCG TTCTTGCAACGCCATCATTTTGGCCTGCTCGTCGCCATAACGGTCGATACGAAAACTTTTGCTCAAGTTGTAACCGTGAATACGGGTGGTGGCCCGCCAA TATTCAATGTTGTTGGACTGGATCCGGTAAACCCCGGGATGGCCACTGGTGTTATGGGGCATCAAGCGTTGACGGTTTTCATAGCTAAAGGCCTGCGGCA
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Amino Acid Sequence |
>histidine kinase
MAIKYWRRPRVPRSLLGRMLLLTLIAILLAQTLSSVIWLSQLRATQLQGLVTSARSLAHSMNATVTYMKSLPLAYRPLVLDQMRSMGGTRFVVSLNERPL DMRALPLTQRKQAVLEAVDQVLRQSLGPAVDLSVKFVSPQDLRIFNAGLTLDELPRSWAHFALTLEPVNPPVLVTQIQMSPGEWLYIASLLPQPYTSLEE EGLPAMQLWFIALSSGFLLLSIGVLVHWQSRPLKRLARAARDLSLGEEQVEPVEIGGGSEVAEVGRAFNTMRVRISRYLTERSQLFSAISHDLRTPITRL RLRVELLEDEALQHKFGRDLDELELLVKGALQCVKDTDIHENIEPVNLNLLLECLIEPYLLPHGNGRVTVTGRASRPFSGKPLALRRCMGNLIDNALKYG KHAHLVIEDHAHAFVLHVDDDGPGVPEQRLEQVFEPHFRLSGHQQGYGLGLGIARNIAHSHGGEVSLQNVRGGGLRVTLSVPRTAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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