Pseudomonas fluorescens AU11136, AA055_RS13960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11136 Contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCAAATAACCATTGATGACCGCGAGGATTGCAGGTGCCAGCTGATGCTTTTCCAGTAAGTGCCGGAAATTCATGATCGTGGTGTCTTCAGGTATCGGG GCGCTCAAGGTCAAACGTGCAAACTGGCGCATGGGCGTGATTTCGTAGAGCGCTTCTTCCATGGTCGGATCGCTCAGGGAAAACCAATTCTGCAACAGAT GAATACGCAGCATGGTTTCCAGAGGATAGGGTTTTCTGCCGCCACCGGCCTTGGGGTAGAACGGCTCGATCAGGCCCAGCAGACCCGTCCAGGGCACGAC CTGATCCATCTCGGCGAGGAAGCGTTCGCGGCGTGTCTGCTTGCGCTTGCCGGCGTATTCGAAATCGGAAAAGCTCATCTGGCTCATAGGCGGCTCGGAT CAGGTGGTCAGGCGTATTTCAGCACATTTGAAAACTTGCTCGGAGATTCCCTAAGGACGCAGTCCTTGGCGGTCAACACGTTTTATAGAGGCAGGATCAT
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| DNA Sequence for Gene |
>AA055_RS13960
TTGTCTACGGCTAATTTGGATTTTGAGCAGTTCCGGGTTTTCCTGGAAAAAGCCTGTGGCATTTTGCTAGGGGAGAACAAGCAGTACCTTGTTTCCAGCC GACTGAACAAGCTGATGGAACAGCAAGGTATCAAATCACTGGGTGAGCTGATTCAGCGCATCCAGAGCCAGCCCCGCAGCGGGCTGCGTGAGCAGGTGGT CGATGCGATGACCACCAACGAAACCCTGTGGTTTCGCGATACCTACCCCTTTGAAGTGCTGAAAAACAAAGTCCTGCCTGAGTTGACCAAGGCCCATCCG GGGCAACGTTTACGCATCTGGTCGGCCGCCTGCTCTTCGGGGCAGGAACCGTATTCGCTGTCGATGGCCATCGATGAGTTTGAGCGCAGCAACCTCGGGC AATTGAAAGCGGGGGTGCAAATTGTCGCCACCGACCTGTCCAGCCTGATGCTCAACAACTGCAAGACCGGCGAGTACGACAGCCTGGCGATCGGCCGCGG TTTGTCCCAGGAGCGCTTGCAGCGTTACTTCGAGCCTAAAGGGCCGGGGCGCTGGATGGTCAAGGCGCCGATCAAGAGCCGTGTGGAGTTTCGCTCGTTC AACCTGCTGGACAGTTACGCCGGGTTGGGCAAGTTCGACATGGTGTTCTGCCGCAACGTGCTGATCTATTTCTCGGCAGAGGTCAAAAAAGACATCCTGT TGCGCATTCACAGCACCTTGAAGCCGGGCGGCTATTTATTCCTGGGCGCCTCCGAAGCGCTCAACGGGTTGCCGGATCACTACCAGATGATCCAGTGCAG CCCGGGGATCATCTACCAGGCCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTAACGGGAGCCCACAAGGCTCCCGTTTTTTATGGCGCTGTGGGGCGGCGGTGCGAGTGTCCCGTGCAACAAAGCGGCAGAAAAGCGGCAGTCGGCGG TCAGTGATTGCCGCTTTTCTGGCATTGCCGCGCCCCAGCCCCCGGCAAAGCCTTGAAATACGGGCATGTGAATATTGGCACGGGGTTTGCTCTATCCAGA GCAAGAAGGACCTGAACCACATGTTCAGGTCAGCCCACAAAGGTTTTTCGACATGAGCATCAGCTTCGATAAAGCGCTCGGTATCCATGAGCAAGCCCTG GGTTTTCGCGCCCAGCGCGCTGAAGTCCTGGCCAATAACATTGCCAACGCCGACACCCCGAACTACAAGGCTCGGGATCTGGATTTTGCTTCTGTGCTCG CGGCACAGAATGACAAGAACAAGAACGGCAGCTTTGCCTTGAACATGACCAACAGTCGCCACATCGAAGCCCAGGGCTTGAGCAGCGGCGATGAATCGCT
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| Amino Acid Sequence |
>chemotaxis protein
MSTANLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGELIQRIQSQPRSGLREQVVDAMTTNETLWFRDTYPFEVLKNKVLPELTKAHP GQRLRIWSAACSSGQEPYSLSMAIDEFERSNLGQLKAGVQIVATDLSSLMLNNCKTGEYDSLAIGRGLSQERLQRYFEPKGPGRWMVKAPIKSRVEFRSF NLLDSYAGLGKFDMVFCRNVLIYFSAEVKKDILLRIHSTLKPGGYLFLGASEALNGLPDHYQMIQCSPGIIYQAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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