Strain | Pseudomonas fluorescens strain AU11136 Contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCACGGGCATGGCGTTGTTTCTGACGATGTTCATCATGGCGCCGGTGTTCGACAAAATTAACCAAAACGCCTTGCAGCCGTACCTTGCCGAAAAGCTCTC GGCGCAGGACGCGATCCTCAAGGCCGAAGGCCCGATCAAGGATTTCATGCTGGCGCAAACCCGCAGCAGCGACCTTGAGCTGTTCGTGCGCCTGTCCAAG CGGACCGACATCGCCACCCCGGATGCCGCGCCGCTGACCATTCTGGTGCCGGCGTTTGTCACCTCGGAACTGAAAACCGCGTTTCAAATCGGCTTCATGA TCTTCATTCCGTTCCTGATCATCGACCTGGTAGTGGCCAGTGTGCTGATGGCCATGGGCATGATGATGCTGTCGCCGCTGATTATTTCGTTGCCGTTCAA AATCATGCTGTTCGTGCTGGTCGATGGCTGGGCGCTGATTATCGGCACGCTGGCCAGCAGTTTTGGCGGGGTGTGACGCCATGCCCGGGAGTAATGCGCA
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DNA Sequence for Gene |
>AA055_RS11595
ATGACCCCAGAAGTCGCGGTTGACCTGTTTCGCAGTGCGTTGTGGCTGACCACCATGATGGTGGCCGTGCTGGTGGTGCCCAGCCTGCTGGTGGGCCTGA TGGTCGCCATGTTCCAGGCGGCCACCCAAATCAACGAACAGACCCTGAGCTTCCTCCCGCGTTTGCTGGTGATGCTCGTGACCCTGATCGTGGCCGGGCC GTGGCTGGTGCAGACGTTCATGGAATACATCCTGTCGTTGTACGGCAGCATTCCGCAGTTGATCGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGTCGCTGCTGGCCCTGACGGACGCGCAGATCAGTACCTGGGTCGCCAGCTTTATGCTGCCGCTGTTCCGGGTCGGCGCGCTGTTGACCACCATGCCGA TCATCGGCACGACCCTGGTGCCCAAGCGCATCAAGCTGTTTTTGTCGATCGCCATTACCCTGGCCATTGTGCCCAGCCTGCCGCCGCTGCCCACCGTCAA CCCGCTGGACCTGAGCGGGTTGATGCTGATTGCCGAGCAAATCATCATCGGCGCGTTGCTCGGGTTTTCACTGCAGCTGTTTTTCCAGGCGTTCGTGGTG GCCGGGCAAATCGTCGCGATCCAGATGGGCATGGGCTTCGCCTCCATGGTCGACCCGGCCAACGGGGTTAACGTGGCGGTGATCGGGCAGTTTTTCACCA TGCTGGTGACCTTGCTGTTCCTGTCCATGAACGGGCACCTGGTGGTGTTCGAAGTGCTCACCGAAAGCTTTACCACTTTGCCGGTCGGTGGCGGTTTATT
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Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVAVDLFRSALWLTTMMVAVLVVPSLLVGLMVAMFQAATQINEQTLSFLPRLLVMLVTLIVAGPWLVQTFMEYILSLYGSIPQLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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