Pseudomonas fluorescens AU12597, AA053_RS06755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAGGGCCAGCGTATTGAAGAAGGAATACGGTCATGGGGACTTCACGCATATTACTCACGCGTCACCTGCTACTGGCGTGCAGCTTCGGTGCATGGCTG GTGTGCGTGAACGCACAGGCCGATGGCACGGGTGAAATTGTGATTACCCGCCATGTCTACCCACGCGCCGTCGGCAGCATTGTGCCGCCCCCTGATCCCA ACCCCACCACGGTCAATGCCAACCCGGCCGCCCAGATCAATGCCGTCACCACCCACGGCGAACTGGGGGACGGGGACTTTGCTCGCGTCAGCACCGGTTC CAGCATCACCCGCGTCATCAACACCGGCACTGGCAGTGTGCCGGGCCTGCTGAATCAAAACAGCGGCATGCCCGGTTTGACCAGCACTGCACGTGCCGGG GGCGGCAGCGGCGGTGGCTCGCTGGGCTCACTCGGCGGCCAGATCAACCGCAGTGTTGAGCAAGGCATGCGCCCGCTCACCTCGCTGGGCGGGCAATGAC
DNA Sequence for Gene
>AA053_RS06755
ATGAACAACCTCGCGCTGCTCTTGACCGTGCTGGTCGCTGCACCGGTGCTGGCTGACAACAATCAGGCCGACCTCAATGCCTCGGGTGCCCATTACACCG GCAACCTGATGATCAATCAGGCTTCAGGCACTCAGCAGCAGCAAGTCAACAGCCGCGCCATTGCCATTGGCAATCAGGCCCAGGCCACGGCCGGGGTCAC GCAACAACTCACAGGTCAGGCAGACCCCGCGATGAACGCTCGGGCCAGCATTGGCGGTGACTCGTTCAGCCAGGGCAGCGGCCTGCTGGGGGTCAACCAG TCCGCCGGTGCCAACAACCAGATGGTCAACGCTGTACGGGTTGCCGTAGGCGCCGGACCGCAAAGTATCGATGACAACGCCTTGTCCCAGCAAAACGTGG CGTTGCAACCAAACTCGGGAGCGGGATCACTCAACACGGGCAGCCGCCAGGTCGTTACCAGCGATCAGGCCTTCACCGGCAGCCGCGGAGTGGTTCAGGT CAACCAGAGTGCCGGGGTGGGGAACCGCATGGCTAACACCCTGAATGTACGGGTCACGCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTCGGGTTACGCGAAGTGCAATGACGTATGCCAACACACACATAACTGATGAAGCATGGAGAAACATCATGAAACCAACAATGGCTCTCAAACCACTGGT CTTCGCTCTGGCTGCACTGATGGCTGTGGCAGCACAAGCAGACAGTAATCGCCACCCCACCCCGACACCGGCAGCCACGAGTGGTGCCAGCGCCGTGATC GCTGATGTGCAGGTCAGTCATGACAACAACATCACCAATAACGGCACGCTCAACAGCGCAAAAGTCACTGACTCTGTGAAAAACACCAACGGCAACGTCG GGGTCAACGCAGCGGCCGGCTCGGGTAACCAGCAGGACAACGCCGCCGCCATTGCCAGCAGTGACCAAAACTTTGTGCTCGGCACTGCGGCGGCCGTCGT GAGCGCCAGCCAGACCAACAGCTACAACAAAGTGAATAACCACGGCACGCAAAACGGCGCCACGCTCAACGACTCCATCCGAAACACCTCCGGCAACATT
Amino Acid Sequence
>autotransporter adhesin
MNNLALLLTVLVAAPVLADNNQADLNASGAHYTGNLMINQASGTQQQQVNSRAIAIGNQAQATAGVTQQLTGQADPAMNARASIGGDSFSQGSGLLGVNQ SAGANNQMVNAVRVAVGAGPQSIDDNALSQQNVALQPNSGAGSLNTGSRQVVTSDQAFTGSRGVVQVNQSAGVGNRMANTLNVRVTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site