Pseudomonas fluorescens AU12597, AA053_RS05105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAAAACCGCGTTTCAAATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACCTGGTAGTGGCCAGTGTGCTGATGGCCATGGGCATGATGATGCT GTCGCCGCTGATTATTTCGTTGCCGTTCAAAATCATGCTGTTCGTGCTGGTCGATGGCTGGGCGCTGATTATCGGCACGCTGGCCAGCAGTTTTGGCGGG GTGTGACGCCATGCCCGGGAGTAATGCGCAATGACCCCAGAAGTCGCGGTTGACCTGTTTCGCAGTGCGTTGTGGCTGACCACCCTGATGGTGGCCGTGC TGGTGGTGCCCAGCCTGCTGGTGGGCCTGATGGTCGCCATGTTCCAGGCGGCCACCCAAATCAACGAACAGACCCTGAGCTTCCTCCCGCGTTTGCTGGT GATGCTCGTGACCCTGATCGTGGCCGGGCCGTGGCTGGTGCAGACGTTCATGGAATACATCCTGTCGTTGTACGGCAGCATTCCGCAGTTGATCGGCTAA
DNA Sequence for Gene
>AA053_RS05105
ATGTCGCTGCTGGCCCTGACGGACGCGCAGATCAGTACCTGGGTCGCCAGCTTCATGCTGCCGCTGTTCCGGGTCGGCGCGCTGTTGACCACCATGCCGA TCATCGGCACCACCCTGGTGCCCAAGCGCATCAAGCTGTTTTTGTCGATTGCCATTACCCTGGCCATTGTGCCCAGCCTGCCGCCGCTGCCCACCGTCAA CCCGCTGGACCTGAGCGGGTTGATGCTGATTGCCGAGCAAATCATCATCGGCGCGTTGCTCGGGTTTTCACTGCAGCTGTTTTTTCAGGCGTTCGTGGTG GCCGGGCAAATCGTCGCGATCCAGATGGGCATGGGCTTCGCCTCCATGGTCGACCCGGCCAACGGGGTTAACGTGGCCGTGATCGGGCAGTTTTTCACCA TGCTGGTGACCTTGCTGTTCCTGTCCATGAACGGGCACCTGGTGGTGTTCGAAGTGCTCACCGAGAGCTTTACCACCTTGCCGGTCGGCGGCGGTTTATT GACCCTTCATTTTTGGGAAGTGGTGGGCAAACTGGGCTGGGTGCTGGGCGCGGCCCTGATGCTGGTGTTGCCGGCCATTACCGCGCTGCTGGTGGTCAAC ATTGCCTTCGGCGTCATGACCCGGGCGGCGCCGCAACTGAACATCTTCGCCATCGGCTTTCCGCTGACCCTGGTGCTGGGCATGGTGATCCTGTGGATCA GCCTGGCGGACATTCTCAATCAGTACCAACCGCTGGCCACTGAGGCCCTGCAGTTCTTACGTGATCTGGCACAGGCGAAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCATGGCCGAAAGCGAGAGTGGAGCCGATAAAACAGAAGACCCCACGGAGAAACGAAAAAAAGACTCCAGGGAAAAGGGCGAGATCGCACGCTCTAAAGA ACTGAATACGTTGGCCATCATGCTCGCCGGGTCCATCGGCCTGATCATCTTTGGCGGTGCGCTGGCGCAGGACATGATGGAAATCATGCGCTACAACTTC AGCATTAGCCGTGAAGCGCTGCTCAACCCCGATTCCATGGGCGCCTTCCTGCTGCACTCGGGCAAAATCGCGCTGATCGCGCTCCAGCCCGTGCTCATTA CCTTGCTGATTGCCGCCCTGATCGGGCCGATTGCACTGGGTGGCTGGCTGTTCGCGGCGGGCAGCCTGGCGCCCAAGTTCAGCCGCATGAACCCGGCGGC GGGGCTCAAACGCATGTTCTCGGCCAAGGCGCTGGTCGAACTGCTCAAAGCGCTGGCCAAATTCTTCATCATCCTGATCGTGGCGTTGATGGTGCTCCAG
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MSLLALTDAQISTWVASFMLPLFRVGALLTTMPIIGTTLVPKRIKLFLSIAITLAIVPSLPPLPTVNPLDLSGLMLIAEQIIIGALLGFSLQLFFQAFVV AGQIVAIQMGMGFASMVDPANGVNVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTTLPVGGGLLTLHFWEVVGKLGWVLGAALMLVLPAITALLVVN IAFGVMTRAAPQLNIFAIGFPLTLVLGMVILWISLADILNQYQPLATEALQFLRDLAQAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site