Pseudomonas fluorescens AU12597, AA053_RS02180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCCAGCCGATGCACCTGCGCTCAATCCCCCACCTGCGGCAGGTGCTGCACACCGTGCCGGCATTTCCGTGCGTGCTGGTGCAGCACTGCGTGCACGAC GAAATGTGCGGCCGCGATACTGGGCCTGTCGGGGAACTGCGCATTCCGTTTTCGCTCTCCACACCGTTGTGAACACGAAGTCGACGCGCGTGAGCGGATG AGCGTTTTTCGCTGGTTTGGGCGATCGCTTGCCCTTGGACCTCAGAGGTGACCGTCGCGTCAAACCCCTGTTGATAAAGACCGTGTACCCGTACCGCAAA ATGGCTTGCCGCATGGCCAGCCATTTTTTTTGCCTGGGGCAAATCCCCCACCTCAATCGCCCGCCACGGCCTTTTAAGAATCGTCTGATTAAAGCCCGGC CCTGCCCCCGATAACCTGCACTGGCTGAATCTGCTCCTGACCGACTCCACGAAGAATGGGTTGGGCTCGAGCCTCATCTCCAGTTATCAGGATTATTACT
DNA Sequence for Gene
>AA053_RS02180
ATGAAGCGTACTGCTCTGCTCATCGCGATGACGGCATTCCCGGCGATCTCGTTCGCCGCCAGCCAAAACACCATCACTTTCAAAGGCCAGGTGTCTGACC AGACGTGCCAGGTGTCGGTCAACGGTAACGCTGGCAGCCCGATCGTGGTGTTGCCCACCGTGGCATCCAGTGATCTGGACACCGCAGGCAAGTTCGCCGG TGAAACGCCTTTCACCATCGCGGTGACGGGTTGCACCGCCCCCACCACGGGCGACCTGAACATTCGCACCACGTTCCTGGGTGCCAACGTCAACACAGGC GGCAACCTGGGCAACACCGGAACGGCGCAAAACGTTGCAATCCAGTTGCTGGATGCCAGCGGTGGCACGCCGATCACCCTGAGCGGCATGACGTCGGTTG AAGGCCTGGTGCTGAAAAAAGACGAAACCGCCACCAGCCACGACTTCGCTGCACGTTACATCAGCACCGGCGCTGCCACGGCCGGTACCGTTTCAGCGTC GGCTCAATACGCCCTCGACTACCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTAACCCCCTGACCTGCCGTCTTCGCGCCTTGCGAAGCGGCGGGTCCGCACCTCGCTTGTCCTTTTCTGTTTTCCCAGCCTTTCGGAAGGAGTTGGCC ATGACCTGCCTGAAACGCTTAGCCCTGTCCGTCGGTTTACTGATCGGCGTAACGCTTGCCCAGAGCGCGATGGCCAGTGTGGTCATGAGCGGCACGCGGG TGATCTACCCCGCCGCCATTCGCGAAAAAGCCCTGCAACTCACCAGCCATGACGCATACCCCAATCTGGTGCAGATCTGGGTGGATAAAGGCGACCCGGC GTCGACCCCACAAACCGCTGACGCCCCTTTTATCGCCAGCCCGCAGATTTTCCGGATGAACCCCAAGGCCGGGCAAATCGTGCGTCTGGTGTACACCGGC AAGGACCTGCCGCAAGACCGTGAGTCGGTGTTCTACATCAACTTCATGCAAATGCCCGCGCTCAAGGCTCACGACATGGAAGCCAACAAGCTGATGCTCA
Amino Acid Sequence
>fimbrial protein
MKRTALLIAMTAFPAISFAASQNTITFKGQVSDQTCQVSVNGNAGSPIVVLPTVASSDLDTAGKFAGETPFTIAVTGCTAPTTGDLNIRTTFLGANVNTG GNLGNTGTAQNVAIQLLDASGGTPITLSGMTSVEGLVLKKDETATSHDFAARYISTGAATAGTVSASAQYALDYL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site