Pseudomonas fluorescens AU12597, AA053_RS13130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGACCTTTGTAGGAGAAGCGCGTAGTGCCATCAGGCATCAAGCCTTTGCCCTGAGTCGAGCGAATGGCCTGACACAGGTTGGTCTTGCCCGACAGGCAGA ACTTACATTGGCGACATTCCGGGGTGTACAGCGGAATAACGTGATCGCCTACCGCTACCGAGGTAACGCCCTCACCGATCGCTTCAACGATTGCGCCGCC TTCATGGCCCAGAATCGACGGAAAAATACCTTCCGGGTCTGCGCCCGACAGGGTGTACGCATCGGTGTGGCAAACGCCCGACGCCACCACCCGCACCAGC ACTTCACCTGCCTTGGGCATGGCAACATCCACTTCCACGATTTCCAGCGGCTTTTTGGCCTCGAAGGCTACGGCAGCACGTGACTTGATCATCGATCGTC TCCAGCAAAGTAAAAACAAGACATGGAGTGTAAATCAGCGCTGGCTGATTAATAATCCAGCCAAAAGCAAAACATTATTGCCAGGCAGGGACAATCCTCC
DNA Sequence for Gene
>AA053_RS13130
ATGAACGAGAACCGCTGGGAAGGTATAGACGAATTTGTTGCCGTCGCAGAGTGCGGTCAATTCACGGCGGCCGCCGAGCGACTCGGGGTGTCGTCTTCCC ATATCAGCCGTCAGGTGGCACGGCTGGAGGAGCGCTTGCAGACGCGATTGTTTTACCGCAGCACCCGGCGCGTGACACTGACCGAAGCCGGGCAGACGTT CCTGCAACATTGCCAGCGTTTGCAGGATGGACGCGAAGAAGCGTTACGTGCGATAGGCGACCTGGCCAGCGAACCCAAAGGGCTGCTGCGCATGACGTGC GCTGTCGCTTATGGCGAACGCTTTATCGTGCCGTTGGTCACGCGATTTATGGCTTTGTACCCGCAGTTACGGGTGGACATTGAACTGAGTAACCGCCCGC TGGACCTGGTGCACGAAAGCCTGGACCTGGCCATCCGGCTCGGCCGGTTGCAGGACTCACGCCTGGTAGCCACGCGCCTGGCCCCACGGCGCATGTACCT GTGCGGCTCCCCCTCCTACCTGGAACGTTACGGACGCCCACACAGTGTGTCAGAACTGGGCCGACACAATTGTTTGATTGGCAGCTCGGACCTCTGGCAG TTGCAACAAGACGGCAGGGAATTTTCGCAGCGCGTACAAGGCAACTGGCGTTGTAACAGTGGGCAGGCGGTGCTGGATGCGGCGCTGTTTGGCGTAGGGT TGTGTCAATTGCCCGACTACTACGTGCTTGAGCATTTGAAAACCGGCGCGCTGGTGTCCTTGCTGGAACCGCATCAACCCCCCAACACGGCCGTCTGGGC CCTTTACCCACAACAGCGGCACTTATCGCCCAAAGTCAGGCAGTTGGTGGATTATCTGAAAGCAGCACTGGCCACACGCGAAGAGTACTCAACCGCCCAG CAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCACTTGCGCACGGGGTTGAGCGCCTTTGGGGAGGTAAACGGATCGATGTTTGCCATGCAATGGATTGCAGCCTTTATGCCGCGGCCGCATCGGCCTA CGCAGGATGCTCCGGTGTTAGCGGTTAACCCACCGTAATCGCAGCCACTCAAGGTCTTCAGGGCGCGTCACCTTGATGTTGTCGGAACGACCTTCGATCA AGCGCGGCGACAAGCCTGCCCACTCCATGGCTGAAGACTCATCAGTGATGTTGGCATCCGCGACCAGGCTATCGGCCAGCGCACGATGCAGTGCGCCGAG ACGAAACATCTGCGGCGTATAGGCCTGCCATATGCATTGACGATCAACGGTTTCGACTACGCGGCCCTGCTTATCGACCCGCTTCAAGGTGTCGCGCGCC GGCACCGCGAGCAAGCCGCCCACCGGGTCATCCGACAACTCACCGAGCAGTTTATCCAGATCCTCTCGGGCCAGATTGGGCCGCGCTGCATCGTGCACCA
Amino Acid Sequence
>LysR family transcriptional regulator
MNENRWEGIDEFVAVAECGQFTAAAERLGVSSSHISRQVARLEERLQTRLFYRSTRRVTLTEAGQTFLQHCQRLQDGREEALRAIGDLASEPKGLLRMTC AVAYGERFIVPLVTRFMALYPQLRVDIELSNRPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCGSPSYLERYGRPHSVSELGRHNCLIGSSDLWQ LQQDGREFSQRVQGNWRCNSGQAVLDAALFGVGLCQLPDYYVLEHLKTGALVSLLEPHQPPNTAVWALYPQQRHLSPKVRQLVDYLKAALATREEYSTAQ Q
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site