Pseudomonas fluorescens AU12597, AA053_RS20555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12597 Contig_37, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTTGAGCAAGGCGGGCTGGACGGTGGCCATCGCCACCAACCAGTCCGGCATTGCACGCGGCTACTACGACATCGCCACCCTGAACGCCATGCACGACC GTTTGCGGGCGCTTGTGGCCGAGCAGGGCGGTGACGTTGGCCGGATTGAATATTGCCCGCACGGGCCTGATGAAGGCTGCGACTGCCGAAAACCCAAACC CGGCATGCTGCGCACGATTGCCGAGCATTACAGCGCCGATTTACATGAATGTTGGTTTGTTGGCGACAGTTTGGGTGACTTGCAGGCTGCAAAAGCCGTC GGTTCACAGCCAGTTTTGGTGAAAACCGGAAAAGGCGAAAAAACGCTCGAAAAAAATCTTCCGGCTACTACCCTGATTTTTAACGATCTGGCGGCAGTTG CCGCAAAACTTATCCACACATAAGGCATTTTTGAACACCTGCTGACTTCCGTTGCCCAGGCCTGTTCACAAATGCGTTATCCGCAACGGTAAAAGCCTCT
|
|
| DNA Sequence for Gene |
>AA053_RS20555
ATGTCGATCCTGCAGGCCATCAGAACTTTTTTCTTTTACCTGCTGCTGGGCACCAGCTCGCTGCTGTGGTGCTCGCTGAGTTTTTTTGTCGCCCCCTTTC TGCCGTTTCGTGCGCGTTATCGTTTTATCAACGTGTACTGGTGCCGTTGTGCACTGTGGCTGACGCGGGTGTTCCTGAACATTCACGTTGAAGTGAAGGG CGCAGAAAACGTCCCGCAGCGTCCGTGCGTGATTCTGGCCAACCACCAAAGCACCTGGGAGACGTTTTTCCTCTCGGCTTACTTTCAGCCGCTGAGCCAG GTGCTCAAGCGTGAACTGTTGTATGTGCCGTTTTTCGGCTGGGCCATGGCCATGCTGCGCCCGATAGCCATCGACCGTGATAACCCGAAAGCGGCACTCA AGCACATCGCCAAGAAGGGCGACGAGCTGCTCAAGGACAACATTTGGGTGCTGATCTTCCCGGAAGGCACGCGCGTGCCTTACGGCACGGTGGGCAAATT CTCCCGAGGCGGTACGGCGCTGGCGGTCAATGCTGATTTGCCGGTGTTGCCGATTGCCCATAACGCGGGCAAGTACTGGCCAAAAGTGGGTTGGGCGAAA AAACCCGGCACCATTGAGGTGGTGATTGGCGAGCCGATGTACGCCAATGGCACCGGGCCGCGCGCCATTGCCGAGCTGAACGACCGGGTTCAAGCCTGGA ACGAACAGGCTCAACGCGCCATGGGTTCGCTGCCGCCAGTGGCTGAACCGGTTGAAGCGATTGAGCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGTTTTGTGGATAACGTGTGTACAAGTTTTGGATTTCTTCGGAAAAACGCTCGTAAGCCTATGATTTATTTACTTATTTCTCGGTATGACTTTTTAACG TAAAACGTGCATAAGTTTTTCTAAGGCTAAAAAAAACCGGCATTTTCGCCGGTTTTTTTGTGCCGCTTATACAGCCTCTTACACCTTATCGATGTTCACG TTCCGGGTTTCCTTAAGGCACAGCATGCCCACCACCAGGCTGACCCCGGTAATCAGCACCGGATACCACAGCCCGTAGAAGATATCCCCGGTGTACACCA CCAGCGCGAACGACACGGTGGGCAGAAAACCACCAAACCAGCCATTGCCAATGTGGTATGGCAGCGACATGGACGTGTAGCGAATGCGGGTCGGGAACAG TTCCACCATCACCGCGGCCAACGGGCCGTAGGTCATGGTCGCAATCAACGTCAGCATGACCATCACCAGCACCACCATGGGCTGGTTGACGGCACTTGGG
|
|
| Amino Acid Sequence |
>glycerol acyltransferase
MSILQAIRTFFFYLLLGTSSLLWCSLSFFVAPFLPFRARYRFINVYWCRCALWLTRVFLNIHVEVKGAENVPQRPCVILANHQSTWETFFLSAYFQPLSQ VLKRELLYVPFFGWAMAMLRPIAIDRDNPKAALKHIAKKGDELLKDNIWVLIFPEGTRVPYGTVGKFSRGGTALAVNADLPVLPIAHNAGKYWPKVGWAK KPGTIEVVIGEPMYANGTGPRAIAELNDRVQAWNEQAQRAMGSLPPVAEPVEAIER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|