Pseudomonas fluorescens AU12597, AA053_RS20495

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGGCCACACGCCAGCAACTTCCCCCGTCGCAACCGCATCATCAGCGGTTTATCCCTGGGGGTACTGGTCGTGGAAGCCAGCGTGGCCAGCGGCTCGCT GATAACGGCGCGGCTGGCGGCCGAACAGGGGCGAGAGGTATACGCCCTGCCCGGTTCCATCCACCACCCTGGCGCGCGGGGCTGTCACCAATTGATCCGC GACGGGGCTACGCTGGTGGAAACCGTTGAGCACATTCTGGAAGGGCTGCGCGGCTGGCGCTCAATGCCGGTGTCCACCGGTGGATTGTTCACGCCAAGTT GTCATCCGCTCGTGCAATTGTTGCAGGCATCGCCCTACACCAGCGAAGGCCTGGCCCGTGCCAGCGGATGGGCATTGCCCACCCTGCTCGCCGCCCTGAC CGAGCTGGAGCTAGAAGGCCACGTGGTCCTGGAGGGCGGACGTTGGTTTGCTCGCGCCAGCTAAGTACACTTGCGCACAGCACATATCTGGAGACATTCA
DNA Sequence for Gene
>AA053_RS20495
ATGATCAGCACCTGGCGCGTACAGCAAGCCGCAACCGCCATTCGCGCGGGCGCGGTGATTGCCTATCCCACCGAAGCGGTCTGGGGTTTGGGTTGCGACC CATGGGATGAAGACGCGGTAGAACGGCTGCTGGCCATCAAGTCGCGGCCTGTGGATAAAGGCCTGATTTTGATTGCCGACAATATTCACCAATTCGACTT TCTGTTTGAGGACTTCCCCCAGGACTGGCTCGACCGCATGGCCAGCACTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCACCAGGGCTTGTTGCCCGAG TGGATTACCGGCGTGCACGACACCGTGGCATTGCGCGTGAGCGATCACCCGCTGGTGCGCGAACTGTGTTCATTGGTGGGCCCGATCGTCTCGACGTCTG CCAACCCGGCGGGTTTGCCGGCTGCGCGAACGCGGCTGAAGGTGGAGCAATACTTCCGGGGGCAAATCGACCATGTGTTGGGCGGCAACCTGGGCGGGCG GAAAAACCCGAGCCTGATTCGCGATCTGGCGACGGGCAAGGTGGTCCGCCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAACGCGGGGCCGCTGTCGCAGGCCGAGAGGCCTTCGCCAGCGGCTACCGGAAGGTTGAGATCAAGGCACCAGAATGGTCGAGCCGGTCGTGCGGCGT GCTGACAGTTCGGTCTGTGCCTTGGCGGCGTCTTTCAAGGCAAAGCGCTGGCTGATGTCCACCGTAATGTTGTCGCTGCGGATCATCTCGAACAGCTCGT CTGCCATTTTTTGCAGGTTCTCGGGGGTATTGGCATACGACGCCAATGTTGGCCGTGTGACATACAACGAGCCCTTCTGCGACAAAATTCCCAGATTCAC ACCCGTCACGGCGCCCGATGCGTTGCCGAAGCTGACCATCAGCCCCCGCGGTGACAGGCAGTCCAGAGACGTCAGCCACGTATCTTTACCGACGCCGTCG TACACCACCGGGCATTTCTTGCCGTCGGTCAGTTCCAGAACCCGCTGGACCACATCCTCGTGGCTGTAGTCGATGGTTGCCCACGCGCCCAGCTTTTTGG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MISTWRVQQAATAIRAGAVIAYPTEAVWGLGCDPWDEDAVERLLAIKSRPVDKGLILIADNIHQFDFLFEDFPQDWLDRMASTWPGPNTWLVPHQGLLPE WITGVHDTVALRVSDHPLVRELCSLVGPIVSTSANPAGLPAARTRLKVEQYFRGQIDHVLGGNLGGRKNPSLIRDLATGKVVRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site