Pseudomonas fluorescens AU12597, AA053_RS20455

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGGAAACCCACAATTTTCTTAACACCCTCCCACAGGGTTCCAGAATCCAATCTCCTGTGACTAACCGCGCTACGCCCGCCTCATCAGCAAACGTCTCCA GATCCTCTTCATCGGCAGGGGCTCGCCCTGAGCCTTCAGCACCGCCCCCAGAGTGGGCTCCTGCGGACTCTGTTAGAAATCTGGAAAGACAAAATCATGT GTTAAAAGAGCTGGCCAAGATCCAGACGACCGCTGGAAAGATCAGACGAAGCACCCTTTAATCTGCGCACCGCCCTCCCGGAAAGTCCGGCCACCCTGCG AACGACCCACCCCATCATGTGTTCCCATCGATGGATAACGCGCTAACGGGCCAACGCCAGCGGCTTTCATATGCGCAACTTCCTACAAAGAAACAGACAT GATTACCTGTCACCACACATAGAATCCCACGGACACTGAACCCTGTTCTACGCTGTCAGTCGTATCGTCAGCTAAAACAGCATCACGCAAAGGAGCCTGC
DNA Sequence for Gene
>AA053_RS20455
ATGGCTGGTCCACGAAGTATGGGTATGTTGGGCGTCAGCCTGGTGGTATTGCTGACCGCGTGCGGTAAAGAAGCCCCCAAAGAGCCTCTGTCGCCACGGG TGTATGTACAGCAAGTGAACACGCGCGAATTTGCTCCCCCGATTCAACTCAGCGGTGACATTCAGGCGCGGGTCGAAACCCAGCTTTCCTTCCGCGTGGG CGGCAAGATCATCGAGCGCAGCGTGGACGTTGGCGATCACATTCAGGCCCATCAAGTGCTGGCGCGCCTGGACCCTAAAGACTTGAAAATCCAGGTCACC ACGGCACAGGCCAGCGTCAGTGCCCAGCAGGCGCAAGTGGTGCAGACCCGCGCCGCATTTATCCGTCAGCAAAAACTGCTGCCAAAAGGCTATACCAGCC AAAGCGAATACGATGCCGCCAACGCCGCGCAACAGAGCGCGCAAAGTGCGCTGGCCGCAGCTCAGGCGCAGTTGGCCAACGCTCGCGAACAGTTGAGTTA CAGCAACCTCGAAGCCGAAGCGCCGGGCGTCATCACGGCGCGGCAGGCCGAAGTGGGGCAAGTGGTACAGGCCACCATGCCGATTTTCACCCTGGCCCGC GACGGCGCCCGGGATGCGGTGTTCAACGTTTACGAGTCGCTGTTTATCGAACCGCCCAAAGACCCGACCGTGCAGGTCACGCTGTTGAGCAACCCGCAGA TCAAGGTCAAGGGCCAGATCCGCGAAATCACCCCCACCGTGGCCGCCCAAAGCGGCACCCTGCAAATCAAGGTGCAGCTCGATGAACTGCCCAAGGGCAT GGATTTGGGCTCGATTGTCACCGTCAACCTGACCCCGCCGCCGAGCCGCAGCATCGAGCTGCCCTGGTCGGCGCTGACCAAAGACGTCAGCGAGCCAGCC GTGTGGCTGGTGGACGGCACTAACAACGTGCGCCTGCAACGGGTCAAGGTCGGGCGTTACCTGACCGGCAGCGTGATCATCAATGAAGGCCTCAAAGACG GAGAGCAGGTGGTGGTCGCAGGCGGACAACTGTTGCACCCCGGCATGCAGGTCGAAATTGCCCCCACGCCAGCCGGGGGCACTCAACTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCTCTGTGGATGGTGCCCCTGGCGGCCGCCCTGCTGGTCGGTTGCTCTGAAGAAAAAGCCCCCGAGCCGGTGCGCCCCGCGCTGTTCGTGGTGGTCCA GCCCGAGCTGACGGAACACTTCGGCCGCTTTGCCGGCACGATCGAAGCCCGCTACGAAAGCACGTTGGGCTTTCGTGTGCCGGGGCGCATTGTGCGGCGG TATTACGACGTGGGCGCGGTGGTCAAACAGGGCGATATTCTGGCCAACCTCGACCCCACCGATCAGCAGAACCAACTGCGTTCGGCGCAAGGCGATCTGG CCAAGGTGCAGGCACAGCTCATCAACGCGCAGGCCAACGCCCGGCGCCAGCAAGAATTGTTCGACCGTGGCGTCGGCGCCCAGGCGCAACTCGACACCGC CCAGGCCGACCTGAAAACCACCGCCGCGTCCATGCAACAGGCCGTGGCGGCGGTCAATCAGGCGCAAGACCAACTCAGTTACTGCAACCTGCGCGCTGAC
Amino Acid Sequence
>RND transporter
MAGPRSMGMLGVSLVVLLTACGKEAPKEPLSPRVYVQQVNTREFAPPIQLSGDIQARVETQLSFRVGGKIIERSVDVGDHIQAHQVLARLDPKDLKIQVT TAQASVSAQQAQVVQTRAAFIRQQKLLPKGYTSQSEYDAANAAQQSAQSALAAAQAQLANAREQLSYSNLEAEAPGVITARQAEVGQVVQATMPIFTLAR DGARDAVFNVYESLFIEPPKDPTVQVTLLSNPQIKVKGQIREITPTVAAQSGTLQIKVQLDELPKGMDLGSIVTVNLTPPPSRSIELPWSALTKDVSEPA VWLVDGTNNVRLQRVKVGRYLTGSVIINEGLKDGEQVVVAGGQLLHPGMQVEIAPTPAGGTQL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site