Pseudomonas fluorescens AU12597, AA053_RS18950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGGACGAGTTGCTCAATGCAATCAAGGCGCACGTGCCCGGTTTCACGGTTGTGCAAAACGCTCACTGATGCTCGGTCAACAGGCCGATCACCTTATAA ATGGGGAACACCATGGCTCGCATTCTGATCGTCGATGACTCGCCGACTGAAATGTACAAACTGACCGGCATGCTCGAAAAGCACGGCCATCAAGTGTTGC AGGCGGGCAACGGCGCAGATGGCGTCGCACTGGCGCGCAAGGAAAAACCCGATCTGGTCCTGATGGACATCGTGATGCCGGGCCTCAACGGGTTCCAGGC CACGCGTCAATTGACCAAAGACCCGGAAACCCAAGGGATCCCGGTCATTGTGGTGACCACCAAGGATCAAGAGACCGACATGGTCTGGGCCGCTCGACAG GGGGCAAAAGCGTATTTGACCAAACCGGTCGAAGAGGTTGCGCTGACCGAGGGAATCAATAAATTTCTGCCAGCCTCCACGCACAAGTGATGGCCGCACC
DNA Sequence for Gene
>AA053_RS18950
ATGCCCGATTCTCTGACCGCGTTTGAGCTGCTGCTCGACATTGACCAGCGCTGTCGCTCGCTGGCGGCGGGGCCTGTAGCCGAGCCCGCCGCGGCGCACA CCTGGAGCGGTATTGGATTTCGCATCGGCGAGCAGTGTTTTGTGGCGCCAATGGGGGAAATCGCCGAGATCCTGCATGAGCCGCGTTTCACCTTGCTACC GGGCGTCAAACCTTGGGTCAGAGGCGTCGCCAACCTGCGTGGGCAACTGCTGCCGATCATGGACTTGTGCGGCTTTTTCGGCGTCGAGTTATCCCCGTTG CGCAAACAGCGCCGGGTGTTGGTGCTGGAGTACGACGACATCTTCGTCGGCCTGCAAGTCGATGAAGTGCTGGGCATGCAGCATTTTGCCCAAACGGATC TGGACACCCACCCACCCGTTTCCCCCGGCTTACCTTTCGCGCCTTATGTACAAGGGCGCTTCGCTGCCGCCCATGACTGGTGGGTATTCAGCCCGTTTGC CTTGGCGCAAGCGCCCGAGTTCCGGGCGGTCGCGGTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGTGAGCACGTGGAACCTCAAGCATCCATACAGCATGTCAGGGCCTGATCGATGACCGCAGCCAACAACGCTAAACCAATGGAAGGGTCGCGCAGCCG TTCGCAGATCATCGTGCTGTTTATCGCCCTGATCGTGTTCATCATGCTGTTGTTCGCCAATTTTGCTTACCTCAACACCCAGTCCAACTACGACAAGCAA TACATCAGCCACGCGGGCGAGCTGCGCGTGCTGTCCCAGCGCATTGCCAAAAACGCCACTGAAGCCGCTGCCGGTAAAGCCGCGGCGTTCCGCCTGCTGA GCGATGCGCGCAACGACTTCAGCCAGCGCTGGGGTTACCTGAAAAAAGGCGACCCGGCCACCGGCCTGCCCGCCGCGCCACCCGCCGTGCACAAAGAAAT GCAGGCCGTTCAGCGCGACTGGGAACAGTTGCTGAGCAACACCAACGCCATTTTGGCCAGTGAACAAACCGTGCTCTCGCTGCACCAAGTGGCGGCAACG
Amino Acid Sequence
>protein PilI
MPDSLTAFELLLDIDQRCRSLAAGPVAEPAAAHTWSGIGFRIGEQCFVAPMGEIAEILHEPRFTLLPGVKPWVRGVANLRGQLLPIMDLCGFFGVELSPL RKQRRVLVLEYDDIFVGLQVDEVLGMQHFAQTDLDTHPPVSPGLPFAPYVQGRFAAAHDWWVFSPFALAQAPEFRAVAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site