Pseudomonas fluorescens AU12597, AA053_RS18940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12597 Contig_37, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCGTCCATGGCCGGGGATGCCGGGCGCGGCTTTGCCGTGGTCGCTGACGAAGTCCAGCGCTTGGCCGAGCGTTCATCGGCCGCCACGCGGCAAATCGA AACCCTGGTGCGGGCGATTCAGGCCGACACCAACGAAGCGGTGATCTCCATGGAGCAAACCACCACCGAAGTGGTGCGCGGGGCGCGTCTGGCGCAGGAC GCCGGGGTGGCGCTCGAAGAGATCGAAGGCGTGTCGCAAAACCTCGCCGCCCTGATCCAAAGCATTTCCAATGCCGCCCAGCAGCAAACCACCTCGGCGG GCCAGATTTCCTTGACCATGAACGTGATCCAGCAAATCACCAGCCAGACCTCGTCCGGCTCGACCGCCACCGCCGACAGCATTGGCAACCTGGCCAAGAT GGCCAGCCAACTGCGGCGTTCGGTGTCCGGTTTTACCTTGCCCGACACCCCTGAACCGCGTGAGCCTCAGTAGTGCGGCGCAATATTGACGGGAGTCGTT
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| DNA Sequence for Gene |
>AA053_RS18940
ATGGTTGACCGGCACGACTACGTAGCCCTTGAGTGGGTCAAAGACGAAATCGGCGAGACCCTCAAACTGGCCCGCGCAGCGCTGGACGGCTATGCGTTGC AGCCTTCGCCCCAGGCGCTGGCGCAGTGCCTGGCGTGCGTGCATCAAGTGCATGGCAGCTTGTTGATGGTCGAGTTCTACGGCGCTGCGTTGCTGGCCGA AGAGATGGAGCAGTTGGTGATGGCCCTGCAACACGGGCGCGTCAGCCAGCTCGACGAGGCCGTGCGGGTCTTGCAACAGGCCTTCAGCCAATTGCCGCTT TATCTGGACCGCGTGCACAGCGCCCGGCGCGACTGGCCGTTGGTGGTGCTGCCTTTAATCAACGACCTGCGCACCGCCCGGGGCCAACCCCTGCTTGCGC AAACCAGCTTGTTCAGCCCGCCCTTGCAAGTGCTGGAGCCGCTGGCGCCCGAGGCGCTGGCGCAACTGCCGGTGCAGGACGTGTCCGAGCGGGTGCCTGC CCTGCGTCAACACCTGCAAAGTGCGTTGCTGGGGCTGCTGCGTGAAGACGACGTGCCGGGTCAGTTGGCGCAACTGGCCGAGGTCTTTGCGCAACTGGAA ACCCTGTGCCGGGGCGCGCCCCTCAATGCGCTGTGGACAATCGCCTCGGCGTTGGTCGAAGGCATGCTCAAGGGCAAAGTCGCCAACAGCCCGGCGCTGC GCAGCCTGCTCAGAGAAACCGACAAACCGCTGCAACGGCTGCAGGCCCAGGGCATCGAAGCGGTCAATCAGCCCGCTTCCGACAGGCTCGTCACCAGCCT GTTGTTTTACATCGCCAAGGCTGAGCGCCCCACGCCGAAAATGTTCAGCCTCAAAGCCCTGTACGAACTGGACGAAGCCATGCCCGATGCGGCCATGGTC GACGCCGAGCGCGCGCGCCTGGCCGGGCCGGACCGCGATGCCATGCGCTCCGTCGTGGCCGCGCTGTGTGAGGAACTGGTGCGGGTCAAGGAGCGCCTCG ACCTGTTCGTGCGCAGCGACCGCACCCACGTGTCGGAGCTCAGCAGCCTGCTGGCGCCGCTGCGGCAGATAGCCGACACGCTGGCCGTTTTAGGCTTTGG CCAGCCGCGCAAGGTCATCATTGACCAACTAGCTGTGGTGCAGAGCCTGGCTCAGGGCCAGCGCGAGCCAACGGACCCGGTGTTGATGGACGTTGCCGCC GCGCTGCTGTACGTCGAGGCCACGCTGGCCGGGATGGTCGGCAGCGTCGAACCTTCGCAACGCGAAGAAAGCCGCCTGCCCACCACCGACCTGATGCAAA TCCACCAGTTGGTGATCAAAGAAGCGCGGCTGGTGTTCGACGAAGCCAAAGACTTGATCAACGACTACCTGGCCGCCGATTACGACCGCGAGGCGTTGCA GGCGGTGCCGGGTTTGCTCACGCAAATTCGCGGGGCGCTGGCGATGATCCCGCTCAACCGCGCTGCCAGCTTGCTGCAAGCCTGTGACGACTACTTGTGC GAGCACCTGTTGCTGGGCCGCGAGCGGCCCGATGCGCGGCACATCGACCACTTTGCCGACGCACTGGTGAGCATCGAATACTATCTGGAGCGTCTGGCCC TGGACCCCGGCGCGGCAGGCGAGGCCGTACTGGACCGTGCCGAAAACAGCCTGATCGCGCTCGGGTATGCCCCGGCCGAACGCAATGTCCCGCTGCTCGA TGACATCCTCAGCCCGACCGAAGTGCTGGTGATGGAAGACCTGCAAGAGTTGCAAGACCCGCAGGTGGTGCAAAGCCTGGCCGACGTGTTGGCCAGCCCG GTGTCGGCACTCAACCCGCCCGCGCAGCACATCCCCGGCAGCCTGTTGCCGCCCCCGGTGGACGAGGTGCCGGTGGACGAAGAACTGCTCGAAGTCTTCC TCGAAGAAACCGATGAAGTGCTGATGGCGCTGCACGAAGCCCTGCCGCAATGGGTGGCCAACCCAGCGGACAGCAACGCGCTGAGTGAGCTGCGACGCGG CTTTCACACCTTGAAAGGCAGCGGGCGCATGGTGCGCGCCCTGGTGCTGGGTGAACTGGCGTGGGCGGTCGAAAACCTGCTCAACCGGGTGATCGAACGC AGCGTGGCGCCGGGGCCGGCGATTCATCAGTTGCTCGAAGACACGCTGGTGATCCTGCCCGAGTTGATCCAGGCGTTTGCCGAGCGAGACCAGCGTCAGC GTGACGACGTCGACGCACTGGCCGCGCGGGCGCATCAGTTGTCCCAAGGCGACCCTTTGCCGTTGTTGATCGAGCAGGACAGCCCGGCCTTTGACCCGCA ATTACTGGAGATCTTCCGGCAGGAAGCGCAGACCCACCTCGACACGTTGAACCGCTTCCTCGATCAGGCCAGCGCGCACATGCCGCTGCATGCCAGTGAT GACCTGCAACGTGCCGTGCACACGCTCAAAGGCAGCGCACACATGGCGGGCGTGTTGCCGATGGCCGAACTGGCGGCGCCACTGGACCATCTGGTGCGTG AGTACAAAGCCCATCACGTGGCGCTGGATCTGGACGAAATCGAGCTGCTGCTCGAAGCCGACGGCCTGTTGCACCGCGGCTTGAAGCAACTGGACGTTGA TCCGCTGGCCGACATCCAGGGCGCGCGCTCCCTGATTGAGCGCACGGAATGCCTGATTGCCGACCGGCTGGATGCGTTGCTCAACGCAACTGGCAGCGCG TTGGTGCCCAAGCGCGACCCGCAGCGCATCACGGCGTTTCTGGAACAGGGCATGGACACCCTGTTTGACGCCGAAGACCTGCTGCGTCACTGGCGTCAAC ACCCCCATGAGCGCGAGGGGCTCGACACGCTGCTGGACCTGTTGACCGCCTTTGGCGAGGCCGCGCACGCGCTCGACCTGCAACCGGTCGACGCGCTGTG CGAAGCCCTGCTGGACCTGTATGGGGCGGTTGAAGAAAGCAGTCTGGCCGTCAGCGATCGTTTTTTCGACGTGGCTGATGACGCCCACGAAGCGCTGATT AACATGCTCGACCAATTGGCCGCAGGTCAGGAAATCACCCCGCAGCCGACCCTCATCCACACCTTGAACCAATTACTGCACCAAGGGTTGGCGCCCGACG CCACGGGGTTGATCCGCCGCGAAGGCGGCCAGACCCAGGACATCACCGAGCTGGGGGCTGCCACTGCACAACTCGATGAGATCGCAGGCGAGGACGACGA TGACGGGCTGGACGACGAAATAGTCGCCATTTTCCTCGAAGAAGCGGTCGACATTCTGGAGAGCGCGGGTCAGGCCTTGCAGCGCTGGTTGAGCGAGCCC GACAGCCTCGCGCCCCTGTCATCGTTGCAGCGTGATTTGCACACCCTCAAGGGCGGGGCACGCATGGCGGGCGTCGTCCCGGTGGGCGATTTGGCCCATG AGCTGGAACACTTGTACGAGGGCCTGCTGGACCGTCGTGCCAACGAGAGCCCGGCGCTGGCGCAGTTGCTGGTTCGCAGCCACCAGCACCTGGCCCTCAT GCTTGAACACCTGCAACAGCAGCAACCGCTGCGCGAGCCCTTTGAACTGATTGAGGCCATTCGCGGCTATCGTCATCCCGGCCCGCCGGTTGCCGGGCAG CCCGTCGCTGAGCCGGACCCAACCAGCGGCGCCGATCCCGAGTTGCTGGAAATCTTCCTCGAAGAAGCCTTCGACATCCTCGAAAGCTCGGGCGCCGCGT TGGCGCGCTGGCAAGCCGAACCGCAAAACACCCTTGAAGTCGAAAACCTGCTGCGCGATCTGCACACCCTCAAAGGCGGCGCGCGCATGGTGGAAATCAC CGCCATTGGCGACTTCGCCCACGAACTGGAAACCCTGCTGGAAGACGTGTCCGCTGGCGTGGTCACGGCGGATGCCGAGTTGTTTGCCTTGTTGCAGGGT TGCCATGACCGCACCGCGCAAATGCTCGATGCCCTGCGCAGCGGGCAGCCGTTGCAGTCGCCGCAGGACTTGATTGCGCGAATTCGCAGCACCGAACGCT CAGACCCGCAAGCGCCCCAGCCCCCCGCGCCGAGCAAGGCCGAAGCCAGTGCCACGGCGGTGACCGAAGGCGAGCGCACCGGGCTGGACACCGTCAAGGT GCCGGCCGAGTTGCTTGAAGACATGGTCAACCTGTCGGGCGAAACCTCGATGATTCGCGGCCGTATCGAGCAACAGATCAACGATGGCCACGTCGCGCTC AATGAGATGCAAACCACGCTGGAGCGCATGCGCGACCAGCTACGCCGTCTCGACATCGAAACCCAGGGCCGTTTGCACAACCGTCCGCACAGCGAGGCGG AGGGGCTGGCCTACGACGAGTTCGACCCGCTGGAAATGGACCGGCATTCGCAGTTGCAACAACTGTCGCGTGCGCTGTTCGAGTCCGCGTCCGACCTGTT CGACCTCAAGGCCACACTGGCCGCGCGCAATCAGGACGCACACAACCTGTTGCAAAAACAGGCGCGGGTGAACACCCAGTTACAAGAGGGCCTGATGGGC ACCCGCATGGTGCCGTTCGAGCGCGTCTTGCCGCGCCTCAAGCGGGTGGTGCGCCAGGTGGCCAGCGAGTTGGGCAAACAGGTCGAATTCAGCGTCATCA ACGCCGAAGCCGAAATTGACCGCAACGTGCTGGAGCGCATGGTGGCGCCGTTGGAGCACATGCTGCGCAACGCCGTCGACCACGGTCTGGAACCCGCCGA GGTGCGCCATGCCAGCGGCAAGCCCGAGCAAGGGATGATTACGCTTGAGCTATCCAACGAGGGCGGCGACGTGGTGTTTGATATCCGCGACGACGGTGCC GGTGTCCCGCTTGAAGCCGTGCGCCGCAAAGCGATCCATCGCGGCCTGCTGGACCCGCTGAACAGCGTCAGCGACCGCGACGTGTTGCAGTTCATCTTGC AACCGGGCTTCTCCACGGCCGAGAAAATCACCCAGATTTCCGGGCGCGGCGTGGGCATGGACGTCGTCCACGAAGAAGTGCGTCAGTTGGGGGGCAGCAT GACCCTCGACTCGGTGGCAGGGCAGGGCGTGCACTTTCAGATTCGTCTGCCGTTCAGTGTGTCCCTCAACCGGGCCTTGATGGTGCAGTGCGCCGATGAG CAATACGCCATCGCGCTTAACACCGTTGAAGGCATCGTGCGGGTGATGCCCAGCGAGCTGGAAAGCTATTACCAACTCAACCCGCCGCTGTATCACTACG GCGGCCAGACCTACGAACTGCGGTATCTGGGCGAGTTGTTACAGACCGTGGTCAAACCCAAGCTGGCGGGCGAAACCCATTCATTGCCGGTGCTTCTGGT GCATTGCCAGGACATGCGCGTGGCCCTGCAAGTCGATGCCCTGGCGGGCTCGCGCGAGATCGTGGTCAAGAGCCTCGGCCCGCAATTTGCTGCCGTGCAG GGGTTGTCGGGTGCGACGATTCTGGGGGATGGCCGTGTGGTACTGATCCTGGATTTGCTGGCCTACATCCGCGCGCATCAGGTGCGTCAGCCGTTGCTGC GCGCCCAGCACGAAGCAGGCGGCCTCGAATTCATCCCGGCCGTGCGCCCGCCGCTGGTGCTGGTGGTCGACGATTCGGTGACCGTGCGCAAAGTCACCAG CCGCCTGCTGGAGCGCAACGGCATGCACGTCATCACCGCCAAAGACGGGGTCGACGCCATGAGCGTGCTCGAAGAACACACCCCGGACCTGATGCTGCTG GACATCGAAATGCCGCGCATGGACGGCTTCGAAGTGGCCACGCATGTGCGTAACGACCCGCGCCTCAAAGACATGCCGATCATCATGATTACCTCGCGTA CCGGGCAGAAACACCAGAACCGCGCCATGGCCATTGGCGTCAACGACTACCTGGGCAAGCCCTACCAAGAGTCGGTATTGCTGGAACGCATCGCCTACTG GAGCACCTTCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCACCGTGTAGGCAGCCTGACGTGCCTGCTCTTGCCGCTGGCCGATCGCGACCTGTTACTGCCCAACGTCGCGATCGCAGAACTGATCGACTACCAGCGT GGCGAACCCAGCAGTGACTCGCCGCCGTGGCACTTGCGCCAGATCATCTGGCGCGACCATCCCTTGCCGCTCATCAGCTTCGAAGCGGCCTGCGGCAGCC CGCTGCTGATTGGCGACCGCGCGCGCATCGTCATCCTCAACACCCTGGGCGGCAACCCGGCGCTCAAGTACATCGCCATGGTGGTCCAAGGCATCCCGCG TTCCTACAAACTCGACAGCCAACTGAGCTTTGTCGACGTGCCCCTATGCCCCCTGGAACGTGCTGCCGTGCAAGTGGGCGAGCATGTGGCCAAGATCCCG GATTTGTGGGCGTTGGAGCGGTTGGTGTTGGGCGCGCAGTAGCCCGACCTTATTGAATCAACTCAATCGAAATGGGACGTTAATGAACAGGAGTTGTGTG
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| Amino Acid Sequence |
>histidine kinase
MVDRHDYVALEWVKDEIGETLKLARAALDGYALQPSPQALAQCLACVHQVHGSLLMVEFYGAALLAEEMEQLVMALQHGRVSQLDEAVRVLQQAFSQLPL YLDRVHSARRDWPLVVLPLINDLRTARGQPLLAQTSLFSPPLQVLEPLAPEALAQLPVQDVSERVPALRQHLQSALLGLLREDDVPGQLAQLAEVFAQLE TLCRGAPLNALWTIASALVEGMLKGKVANSPALRSLLRETDKPLQRLQAQGIEAVNQPASDRLVTSLLFYIAKAERPTPKMFSLKALYELDEAMPDAAMV DAERARLAGPDRDAMRSVVAALCEELVRVKERLDLFVRSDRTHVSELSSLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVQSLAQGQREPTDPVLMDVAA ALLYVEATLAGMVGSVEPSQREESRLPTTDLMQIHQLVIKEARLVFDEAKDLINDYLAADYDREALQAVPGLLTQIRGALAMIPLNRAASLLQACDDYLC EHLLLGRERPDARHIDHFADALVSIEYYLERLALDPGAAGEAVLDRAENSLIALGYAPAERNVPLLDDILSPTEVLVMEDLQELQDPQVVQSLADVLASP VSALNPPAQHIPGSLLPPPVDEVPVDEELLEVFLEETDEVLMALHEALPQWVANPADSNALSELRRGFHTLKGSGRMVRALVLGELAWAVENLLNRVIER SVAPGPAIHQLLEDTLVILPELIQAFAERDQRQRDDVDALAARAHQLSQGDPLPLLIEQDSPAFDPQLLEIFRQEAQTHLDTLNRFLDQASAHMPLHASD DLQRAVHTLKGSAHMAGVLPMAELAAPLDHLVREYKAHHVALDLDEIELLLEADGLLHRGLKQLDVDPLADIQGARSLIERTECLIADRLDALLNATGSA LVPKRDPQRITAFLEQGMDTLFDAEDLLRHWRQHPHEREGLDTLLDLLTAFGEAAHALDLQPVDALCEALLDLYGAVEESSLAVSDRFFDVADDAHEALI NMLDQLAAGQEITPQPTLIHTLNQLLHQGLAPDATGLIRREGGQTQDITELGAATAQLDEIAGEDDDDGLDDEIVAIFLEEAVDILESAGQALQRWLSEP DSLAPLSSLQRDLHTLKGGARMAGVVPVGDLAHELEHLYEGLLDRRANESPALAQLLVRSHQHLALMLEHLQQQQPLREPFELIEAIRGYRHPGPPVAGQ PVAEPDPTSGADPELLEIFLEEAFDILESSGAALARWQAEPQNTLEVENLLRDLHTLKGGARMVEITAIGDFAHELETLLEDVSAGVVTADAELFALLQG CHDRTAQMLDALRSGQPLQSPQDLIARIRSTERSDPQAPQPPAPSKAEASATAVTEGERTGLDTVKVPAELLEDMVNLSGETSMIRGRIEQQINDGHVAL NEMQTTLERMRDQLRRLDIETQGRLHNRPHSEAEGLAYDEFDPLEMDRHSQLQQLSRALFESASDLFDLKATLAARNQDAHNLLQKQARVNTQLQEGLMG TRMVPFERVLPRLKRVVRQVASELGKQVEFSVINAEAEIDRNVLERMVAPLEHMLRNAVDHGLEPAEVRHASGKPEQGMITLELSNEGGDVVFDIRDDGA GVPLEAVRRKAIHRGLLDPLNSVSDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMTLDSVAGQGVHFQIRLPFSVSLNRALMVQCADE QYAIALNTVEGIVRVMPSELESYYQLNPPLYHYGGQTYELRYLGELLQTVVKPKLAGETHSLPVLLVHCQDMRVALQVDALAGSREIVVKSLGPQFAAVQ GLSGATILGDGRVVLILDLLAYIRAHQVRQPLLRAQHEAGGLEFIPAVRPPLVLVVDDSVTVRKVTSRLLERNGMHVITAKDGVDAMSVLEEHTPDLMLL DIEMPRMDGFEVATHVRNDPRLKDMPIIMITSRTGQKHQNRAMAIGVNDYLGKPYQESVLLERIAYWSTFHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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