Strain | Pseudomonas fluorescens strain AU12597 Contig_35, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATGGGCAACGCAGGCCAAGTAAACTATGCCGCGGCCAAAGCCGGCCTTGAAGGTTTCAGCCGTGCTCTGGCGCGTGAAGTGGGCTCGCGCTCCATCACG GTCAACTCGGTAGCGCCCGGTTTTATCGATACCGACATGACGCGCGAATTGCCTGAAGCACAGCGTGAAGCGTTGCTGACACAGATTCCACTGGGTCGTC TGGGTCAGGCTCAAGAGATCGCGAATGTGGTGTCTTTCCTGGCTTCGGACGGCGCAGCTTACGTGACTGGGGCTACAATCCCGGTCAACGGCGGGATGTA CATGAGTTAAATGTGACGGATTGCTTCAAAAAAATGTCATACGAGCTGTCTAAAATCCGTTATAAAGCTGCATCTTTTTATAGGTAGCCGGTCATTGCGG GGCACGTGCATAGCTTTCAGTTGAAAAATTGAAAAGCCTTTAGATACACTTGCCCACTGGCCAGCTGCCTGAATTTGTCCATTAGGAGTGAAAACAAGGT
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DNA Sequence for Gene |
>AA053_RS08910
ATGAGCACCATCGAAGAACGCGTCAAGAAAATCGTTGCCGAGCAACTGGGCGTTAAAGAAGAAGAAGTGACCAACAGCGCTTCCTTCGTTGAAGACCTGG GTGCCGACTCCCTTGACACCGTTGAGCTTGTGATGGCTCTGGAAGAGGAATTCGAGACCGAAATTCCTGACGAAGAAGCTGAGAAGATCACTACTGTACA AGCTGCTATCGATTACGTTACTGCCCACCAGGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGTTTGTAATCGTTGCACGCTGTCATGGAAAAACCGCACTGCCGCTCAGGCGTGCGGTTTTTTCTTTAGGCGTGATGCAAAGTGTCGTCAATAGAATAA AGGAGAGTGCTGTGTCGCGTAGACGCGTCGTAGTCACCGGTATGGGGATGTTGTCGCCACTGGGTGCGGATGTTCCGAGCACCTGGCAAGGCATTCTGGC AGGCCGCAGTGGCATTGGTCTGATCGAACACACGGATCTTTCTGCCTATTCCACCCGTTTTGGCGGCTCGGTACAGGGCTTTAACGTCGAGGATTACCTC TCCGTCAAAGAAGCCCGAAAACTTGACCTGTTTATTCAATACGGTTTGGCAGCTGGTTTTCAGGCAGTGCGTAATGCCGGCCTTGAAGTCACTGACGCCA ATCGTGAGCGCATCGGTGTGGCGATGGGGTCGGGTATTGGCGGTTTGACCAATATCGAAGAAACCAGCCGTACCTTGCACGAACAAGGCCCGCGACGGAT
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Amino Acid Sequence |
>acyl carrier protein
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEEAEKITTVQAAIDYVTAHQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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