Pseudomonas fluorescens AU12597, AA053_RS00525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACGTGTTATCCGTTGCGCTGAGCAAGGCAGGCATCCAGGCCCGCAGTGCCGCGATGTCGATGCCAGACACACTGGTGATGTGTAAAACCATTCAAGTTG AAACCGGCCTGAACGAGCAGGACCTTGAACTGCACGTGCGCCTTGAAGCGGAACACTACGTCCCATACAACCTCGATGACGCCGCGCTGGATTTCGAGGT GTTGGGGCCTTGCGCCGATGACCCGCACCGCACGAACGTGTTGCTGGTGGTGTGCCGCCAGCAAGCGCTTGAGTGGCATCAATCGGTACTGGTGCAGGCC GGCTTGCAGGCGAAGGTCATTGATGTGCGCGATCACGCCCATGCCCGGGGCCTGCACTGGTTGAGGGGCGTGCCCGGTTATCAGCCGGACAATCCGTTTG CCGGGGTGAAAGTCCATCCCCGCCTCGCGCCCGAAGCACTCTTCTGCGATGCTGCGCAGCTGTTGACAGCCTGTGGTCTGGCCTTGAGGGGGTTTGATTG
DNA Sequence for Gene
>AA053_RS00525
ATGGCGCGAATCAATTTGTTGCCATGGCGTGAGTGGCTGCGCGAAAAGCGCCGCAAAAGGTATATAGGCATGCTGGTGGCGTTGCTGGTAGTCACGGCTG CGGGTTTGTATGTGCTGGATCATTTTGTGGACCGCGCCGTGGAGCGGCAGTTGGCGCGTAACGACCTGATCAGGAGCGCCATGGTCCAGCTGGATGGGCG TGCGCAGCAGATCGATCAGTTGAAAGTACGTCGCGAGCAATTGCTGGAGCGCATGCAAACCATCGAGACCCTGCAAGGCAATCGTTCGGGCAGCAGCATC GTGCTTGATCAACTGGCGCGCAGTTTGCCGGAAGGTGTGTATTTCACTGACGTGAAGATGGCCGAGCGCACCATTGCGATTACAGGGGTGGCGCAGTCCA CTGCACGGGTCGCCGAGTTGATGCGCAATCTCGACGCCTCCCATTGGCTTGAAGCCCCTACGTTGATTGAAGTGCGCGCCGAAGACGGTCAGGACGCCAG CCCCGCCCGGTTATTTCACATGACCGTGCTGCAATCGCAAAACGGCCATGATGGCGGGCAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGTCGCGCACTGGCTGGAGAGCCTGCGTTCGGTTGACCTGCATGAATTGAATCTCAAACAGGCCGGGACGTGGTCAGGCAAGCGTAAAGCAGGTGTCGC GACCGGGTTTGTGGCGTTGCTGGTGCTGGCGGGTTATGCGCTCTGGTTGCAGCCCGGACTGGCCCGGCTTCATGAGCAACGCAGCGCCGAGCCCGTACTC AAAGCCCAACTGGTAAACCGTGCCCAAGAGGCGGCGTCACTGGTTGACCACCACCAGCACCTTCAAGCATTACAAACGGCCTTCGACGAGGTGATGCGGC AACTGCCGCGCCAGTCCCAGGTGCCGGGGCTGCTGGATGAAGTGTCCCGGCTTGCCCAAAACAGCGGCCTGATCATCGAGCAGATCCAGTGGTTGCCTGA AACACTGCAACCCGCTTACAGCGAGCTCCCCCTGCAATTGAGGGTCGTGGGCGGGTATCACGACCTTGGGCTTTTTCTCAGTGGTATTGCGGGTTTGCCA
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREWLREKRRKRYIGMLVALLVVTAAGLYVLDHFVDRAVERQLARNDLIRSAMVQLDGRAQQIDQLKVRREQLLERMQTIETLQGNRSGSSI VLDQLARSLPEGVYFTDVKMAERTIAITGVAQSTARVAELMRNLDASHWLEAPTLIEVRAEDGQDASPARLFHMTVLQSQNGHDGGQF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site