Pseudomonas fluorescens AU12597, AA053_RS21825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12597 Contig_31, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTATGCCTCAACATCCCTGAATAACTTCAAGCCTGTTGGAAGGGCCTGACCTAAGATTTTAAAATCTGCGCGGCCTGTTCACTGTTTAATAGCCATCC ACCTTCTACCATTGCGTTAAGACTTTTATGGCCGAGCGCTTAAACAATTGATCGTTAAAAAGTGGTTGATATCACGTTAAACACTTAATCAAATCATCGT CTGTAGGGTCAGGTATAAAACCACTGATACTCAGGCACATAAGCATTTCTGTATGACTGCTGTTTGATCGATTGTCCGTTTTATACACCCGTGGGGGCGC CATGCTCACCTACGTGTTTACCTTGCTTGTCGCAGACCTCAACGGCTCCATGCTGGTTGATAGTCCCCTTCATAACGCGCTTCATTCAGCCTTCATACAG AAATTTCACCTGATGTGATCCATGCTCTGGGTATGATTTGGGCCATGTGCTATTGCTCTATGGTCTCTCATTACTCATTCACATCGGACGTCACGCCTTT
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| DNA Sequence for Gene |
>AA053_RS21825
ATGAGCTCGCTGCCCTTCTTGCCGTTTTCCAAACCAACCATCGATGAAGCCACCATTGCTGCCGTGGGCGACGTGTTGCGCTCGGGCTGGATCACCAGCG GGCCAAAGGTTCAGGCATTCGAGGCGCAATTGTCCGAGTACATGGGCGGTCGCCCGGTGCGCACGTTCAACTCCGGCACGTGCACCATGGAAATCGCCCT GCGCATCGCAGGGATCGGTGCAGGTGACGAAGTCATCACGACGCCGATCTCATGGGTCGCCACTGCCAATGTGATTCTCGAGGTCGGCGCTACGCCGGTG TTTGCCGATATTGATCCGGTCACCCGCAATATTGACCTGAAGAAAGCCGAAGCCGCGATTACGCCACGCACCAAAGCCATCATTCCGGTTTACCTCTCCG GCCTGCCGGTGGACATGGACGCCCTGTACGCTCTGGCCAAAAAACATAACCTGCGCGTGGTCGAAGACGCCGCTCAGGCCCTAGGCGCGAGCTGGAACGG GCAGCGCATCGGCGCACGCGGGGATTTCGTGTCGTTCAGTTTCCAGGCCAACAAGAACATCACCTCGTCCGAGGGCGGGTGTTTGGTGCTCAATAACGAA GAAGAAGCGCGGCTGGCTGAGAAATACCGCCTGCAAGGCGTCACCCGTACCGGATTCGATGGCCTGGATGTCGACGTTCTGGGCGGCAAGTTCAACATGA CTGACATTGCGGCTGCCATCGGTCTCGGGCAGTTCGCCCATATCGAGACGATTACCGCGCACCGCCGTGAATTGGCCAGGCATTATTTCGAGTGTTTCGG CCCTGGCTTTGAAGCCGAATACGGCGCGCAATTGCCTGTGGCTGATTTCAGCACTACCAATTGGCACTTGTTCCAGCTAGTGCTGCCTGAGCGCAAGGAC GGCCAACCGGCACGGGCTACCTTCATGAAAGATATGCAAGCATTGGGCGTGGGCGTGGGCTATCACTACCCGCCCATTCACTTGCTGAGCCTGTATCGCG CGCAAGGTTTCAAAGAAGGGATGTTCCCCGTCGCAGAACGCGTAGGGCGGCTGATTGTGTCATTGCCGATGTTCACGGCGATGACTAAAGCCGATGTGGA GCGGTCGGTTAAAGCCGTCAAGGCCGTGTTGCAGAACGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATTTCGCTGCCGGTAGAGAGGTCTACCGGCAGCGACCGTCCCGCCGTGGCTTACTCGCCAATGGCGGCTTTGTAGCCAGCGGCATCCAGCAGCTTGT CCAGCTCAGCGGTGTTGCTTGGCTTGAGCTTGAAGATCCAGCTCGCGTAAGGATCGCTGTTCAGGCTTTCAGGGCTGTCGGCCAGCGTCTCACTGACCGC GATCACTTCACCGGACACTGGCGCATAGATGTCCGAGGCGGCTTTTACCGACTCCACGACGCCTGCAGTGTCGCCTGCGGCAAACACTTTGCCCACTTCG GCCAACTCAACGAACACCACATCCCCCAACGCTTCCTGAGCGTGATCACTGATACCCACAGTGACAGTGCCGTCCGCTTCCAGACGGGCCCACTCGTGAC TTTCGGCAAAGCGCAGCTCAGCGGGGATATTGCTCATATTCAGTGTCCTCAATAAGAAATGTCAGCCGCTTGCACACAGCGCAAGCCTGCCGGTAAACGT
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| Amino Acid Sequence |
>aminotransferase DegT
MSSLPFLPFSKPTIDEATIAAVGDVLRSGWITSGPKVQAFEAQLSEYMGGRPVRTFNSGTCTMEIALRIAGIGAGDEVITTPISWVATANVILEVGATPV FADIDPVTRNIDLKKAEAAITPRTKAIIPVYLSGLPVDMDALYALAKKHNLRVVEDAAQALGASWNGQRIGARGDFVSFSFQANKNITSSEGGCLVLNNE EEARLAEKYRLQGVTRTGFDGLDVDVLGGKFNMTDIAAAIGLGQFAHIETITAHRRELARHYFECFGPGFEAEYGAQLPVADFSTTNWHLFQLVLPERKD GQPARATFMKDMQALGVGVGYHYPPIHLLSLYRAQGFKEGMFPVAERVGRLIVSLPMFTAMTKADVERSVKAVKAVLQNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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