Pseudomonas fluorescens AU12597, AA053_RS13860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_22, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGACATTTCAAGGCTGAGCCAGATGCCTTGGCTGTCTTCGTGGCAGTCAAGGCCGGTTAGAAATTGCCCGGCGCAAGGCCCGGCCACGCACTCGCCGGA CTCGATCAAGAACAGGGCCGCGTGGGTGGCGCATTTAATCAGGCTGGTGCTGTCGTCGAGAAACTGGTCGGGCTGCCACTCCAGACGGACACCCCGGTGC GGGCAGCGGTTTTTGTAGGCATAGACCCGGCCCTTGCGTCGCACGACAAGCACGTCTGATTCGTCTATTTGAAAGCCGCGACTGTTGCCTTCTTTCAAGT CCTCAGAGGGGCATAACCACTTCATGGCAATCCTTAATGGCTGCTGATACTCGCGTAGATGACGCGGGTGACAGGGTGTTAATAGGTTGACGCGCAAATG CAAACAATTATCAAATGGCTGGCTGCTCCGCGATGTGCTGTGTCCACGGCGCGGGATTTTACTGTTCCCGCTGACCCACTTATTAAAGGAACGCCTTTGT
DNA Sequence for Gene
>AA053_RS13860
ATGCGCTTGCGTCTTCGCCTGATTACGCTCTTTGCTGGCCTTGTGATCACGACTGTCAGCTCGGCTGCCGAATTGCCACACCGTTGGGTCAGTGCCGGTG GGGCACTCTCGGAATGGGTCTGCGCGCTGGGGGCGGAGTCTAAATTGGTTGGGGTCGATACCACTAGCCAACATCCTGAATCACTTAAATCTCTGCCCAG CATCGGCTATCAGCGTCAGCTGTCGGCAGAGGGCATCCTGAGCCTCAGGCCTGATGTGTTGATCGGTACGCAAGAGATGGGACCCGCCGAGGTCTTGAAG CAGATTCAAGCGGCCGGGGTGCCGGTTGAAATGTTCTCGGCGCAGGCTGATCTGACGACCCTGCAAGCGACGCTGACGCATTTAGGGCGATTACTTGGCG ATACAGCGCACGCCAAGGACGTGTTTGACCGTTTTAAGCAGCACATGGATCAGCAGCAGGCTCAGGTCGAGCACTTGCAAGCAACGCACAAAATGCCGGG CGTCCTGTTGTTGCTGGGTCATGCGGGTGGTAAACCGATGATTGCCGGTAAGGACACCGCTGCCGATTGGTTGCTGACGCAAGCCGGCGGCCGAAACCTT GCCACCCATTCAGGCTACAAGCCTTTCTCGGTCGAGGCGTTGGCGGGGCTGAACCCGGAGGTTCTGGTGTTTGCAGATCGCAGTCTGAGCGGTGAGGCCG CCCGTGCCGCCCTGTTGAAAGAAAACCCGGTGCTGGCATCGATTCGCGCAGTCAAAGCAGGGCGGCTCTATGAAGTGGACCCAACCTTGTTGGTCGGCGG GCTGGGGCCGCGGTTGCCGGAGCGTCTCAAGCAGCTCACGGTTGAGTTTTACCCCGAGGCCGCGGCCGCTCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAACGCTGGTAAAACCCCGTTCTTTGTTTATTGGTTTGACCCTTTTGTGCTTGCTGGCGACCTGGTTGTCGCTGGCGCTTGGGCCGGTGAGTTTGCCGCT GTTCGATACGTTGCGTGCAGCCATGCGGTTGATGGGGTTGCCGGTACAGGGGGAAGGTCTTGAGCAGGCGGAGTTGATTCTCGGGCAGATCCGCTTGCCG CGTACCTTGCTTGGGTTGGCGGTCGGCGGTGTGCTGGCGCTGTCGGGCGTTGCGATGCAGGGCTTGTTCCGCAATCCGTTGGCCGACCCCGGTCTGGTCG GGGTATCCAGCGGTGCAGCCCTGGGAGCGGCGATTGCCATCGTAGGCGGCGCTGCCTTGGGTGGGTTGCCCGACTTCATCGGGCCGTACTTGCTGTCGCT CTGTGCGTTTTTGGGGGGCTTGGGAGTCACTGCGCTGGTTTACCGACTGGGGCGGCGAAACGGCCAAACCCATGTGGCCGTGATGTTGCTGGCGGGGATC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLRLRLITLFAGLVITTVSSAAELPHRWVSAGGALSEWVCALGAESKLVGVDTTSQHPESLKSLPSIGYQRQLSAEGILSLRPDVLIGTQEMGPAEVLK QIQAAGVPVEMFSAQADLTTLQATLTHLGRLLGDTAHAKDVFDRFKQHMDQQQAQVEHLQATHKMPGVLLLLGHAGGKPMIAGKDTAADWLLTQAGGRNL ATHSGYKPFSVEALAGLNPEVLVFADRSLSGEAARAALLKENPVLASIRAVKAGRLYEVDPTLLVGGLGPRLPERLKQLTVEFYPEAAAAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site