Pseudomonas fluorescens AU12597, AA053_RS15805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTTTCTGGTGTCTCAAGAGCACGGAGTCAGCCGCGTGGTGGTGCTGCAGCATGCCGTTGAAACCCGCCTGCCCAACGGCGCAACGCTTAACCTGCAAGA AGGCCAGTCAGCGCTGCTGCATGCCGACCGCATCAGCCCGGTGCCCGGTGAACAACGCCAGCGCGCCGACTGGCAAAGCGGCAGGCTGAACGTGCTGGAT GATCCGCTGGAGCAGGTCGTGGATGCGTTGAGGCCTTATACCCGTGGCTTCGTACGCGTGGCGCCCGAGGTACGGCAATTACGCGTACAAGGCGTGTATC CGCTCAACGATCCCCAGCGGGCATTCGCCGCACTGGCAGAAACCCATGCCATTCGCGTGGATCACTACAGCCCATGGCTGACCGTGATCAGCGCCCGATG AGAGTGATGTTTTCTTTTTGAGCATTAATCGTATTTGTGTCCGGTTTTCATTTCTCATCCCACCTATCTCCTGACACCTTCACACGATCAGGAGAATGCT
DNA Sequence for Gene
>AA053_RS15805
GTGATCAACCCGTGGCCCAACGCCCTCTGCGTTGCCGTTGCTCTGGCAACGGTGGCGAGCCCTGCACTGGTTCAGGCGCAAGACGCGAATTTCAACCTTC CGGCTGGCCCCTTGTCCACTACCCTCAATGCGATTGCCAGCCAGAGCGGGAACATCATCTCCCTTGAACCCGCCCTCGTGCAGGGCAAACAGGCACCGGC TGTGGTCGGGCGCATGTCGCCCGAGCAGGCGATGGACGCGGCACTGGCAGGCAGCCGTCTGCAATTGCGCATCACGGGCCAGGGCAACTTCAGCGTCGAA CCGGCTCCGCAAAACGGCGATGCACTGCAATTGGGGGTCACCCGCGTCGTCGAGCAAAGCCGCGACGCCACCACTGAAGGTTCCGGGTCTTACACGGCCC AGGCGGTCACCATCGGCAAGGGTTCACACAGCCTCAAAGAAACACCACAGTCCGTCACCGTGATCACCCGCAAAATGCTCGATGACCAAAACCTCAACAC CATCGATCAAGTCATGGAGAAAGTCCCCGGAATCACCGTGTACGACTCTCCCATGGGCGGTAAGTACTTTTACTCGCGCGGATTTCGCATGAGCGGCCAG TATCAGTACGACGGCGTGCCGCTGGACATCGGCAGCAGCTACGTACAGGCCGACAGCTTCAACAGCGACATGGCAATTTATGACCGGGTTGAGGTGTTGC GCGGTGCCGCCGGCATGATGAAGGGCGCGGGCGGCACAGCGGGCGGGGTCAATTTTGTGCGCAAACGCGGCGGGTACACGCCGCACACGCAACTCTCGCT CTCGGCGGGCACATGGGACAACTACCGCGGCCTGGTGGACACCGGCGGGCCCTTGAATGAGTCCGGCACGTTGCGAGGCCGCGCCGTAATGGCCCAACAA ACCCGCCAGTATTTTTATGACGTCGCTGAACGCCGCGACCAGATTTACTACGGCGCCCTTGATCTGGACCTCACCCCGGACACCACGCTCGGCCTGGGCC TGGCGTATGAAGACGTAGATGCCACCCCGTGCTGGGGTGGGTTGCCGCGCTATGCCGACGGCAGCGACTTGAAGCTCAAACGCTCCACCTGCCTGAATAC CGCGTGGAATAACCAGCGCAGCAAACGCACGACCGTCTTCGGTGACCTGACCCACACCCTCAGTGACGACTGGGCACTCAAGGTGGCCGGGGTGTATTCC AAAAATACCCAGGACATGGAATACGCCTTCCCCAGCGGGCCTGTTCCCGTAGGTGCTACCCACACCAACACGCTCATGCTGGGGAGCATTTACGACTACG ATCAGGTCGACTACGGCTTCGATGCCTATGTCGATGGCACGTTTGATGCCTTCGGCCAAGCGCACGAACTGATCGTGGGTGCCAACGCCAGTCGCTCGCA TAAAGATGACTTCTACGCCGTGGCGGCCCTGCCCCAGCGCCAGGACATCTTCAATCCGGATCACCATCTGCCACGGCCGGACGAGGGCTACTACCTTGCC AATGCCTCGCGGGGCGGCCCGGTGGACATGCGCATCCAGCAATATGGCGCCTACAGCCTGGCCCGACTGAAACTGGCCGATCCTCTGACCGTTGTGGTTG GCAGCCGGGTCAGCTGGTACTCATCGGACAGCGACTCCACCACCTACTGGCGCGGTGAAGGCACCCCGGTCAGCTCCAAAGCCAGGGAAAGCGGGCAAGT CACCCCCTTTGCCGCCGTATTGTTCGACATCAACGATCACCTCACCACTTACGCCAGCTACACCGACATTTTCACCCCACAAGGCGGCTACAAAACCATC GACGGCAGCAGCCTCAAACCGTTAATCGGCAAAAGTTACGAGCTGGGGATCAAGGGCGAATGGTTCGAAGGACGCCTCAACAGCGCTTTTAACCTGTTCC GCACCGTGCAAAACGATGCCGCGCAAGATGATCCGTTGTGCCCGGACAGCAGTTGCTCACTGAACTCCGGCAAAGTCCGCGCCCAGGGCTTCGAGGCAGA AATCAGCGGCGAAGTTATCGAGCGCCTGCAACTGCTGGCGGGCTACACCTACACCCAGAGCAAAGTACTGGAAGACGCCCAGCCCGATCAGAAAGGCCTG GCCTACACCTCTTACGTGCCGCGTCACCTGTTGCGGGTGTGGGCCGATTACGCACTGACGGGCGCCCTGGAGCGCGTCACGTTAGGGGCGGGCGTCAACG CGCAGAGCAGCAACTACCGCGTGTCGCCCATCAGCGGCAACGACGTCAGCCAGGCAGGTTACGCGGTATGGAACGGGCGCATTGGCTATCGCATTGATGA CACCTGGTCGGTCGCGCTCAATGGCAACAACCTGTTCGACAAACGCTACTACGCCAGTATCGGCACTGAAGGGTTCGGCAACTTCTATGGCGAACCGCGT AACGTCGTCATGTCGCTCAAGGCAGACTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCTGCACCATCGCTGCCCCTGACACACGGGCAGCGACGGGTTACAGCATCTGCTCGGCCAGCAATATCAGGGCAATCAGGATCATGATGGCGCCCGAG GTCTGACTGACCCGTTGCGCGGCGCCGGGCCGGGTTTGCAGCACCGCTCGGGCGCCGAATCCAACCAATAAATACACAACGCCGCAACTGACCGCATGCA GCCCGCCCAGGGCCACGATCTGCGCAGGCACTGGCCATGTCGACAGGGGGTCGGTGAACTGCGGCAACAGCGCCAGAAACAACAAAAACACCTTCGGATT CAAACCGCTGACGCACAACCCCTTCCACGCCCAACGTGACCAAGAGTCCGCCACCTGAACGCTCCCGGACACCGGGGTGGCGGGGTTTCTGAGCATCCCC ACGCCAAGCCAGAACAAATACAGCGACCCAGCCACGGTCAGCACCTTAAGAATCATCGGATTGCTGGCCATCAACCCGCCGACGCCCGCCGCGACAATGA
Amino Acid Sequence
>TonB-dependent receptor
MINPWPNALCVAVALATVASPALVQAQDANFNLPAGPLSTTLNAIASQSGNIISLEPALVQGKQAPAVVGRMSPEQAMDAALAGSRLQLRITGQGNFSVE PAPQNGDALQLGVTRVVEQSRDATTEGSGSYTAQAVTIGKGSHSLKETPQSVTVITRKMLDDQNLNTIDQVMEKVPGITVYDSPMGGKYFYSRGFRMSGQ YQYDGVPLDIGSSYVQADSFNSDMAIYDRVEVLRGAAGMMKGAGGTAGGVNFVRKRGGYTPHTQLSLSAGTWDNYRGLVDTGGPLNESGTLRGRAVMAQQ TRQYFYDVAERRDQIYYGALDLDLTPDTTLGLGLAYEDVDATPCWGGLPRYADGSDLKLKRSTCLNTAWNNQRSKRTTVFGDLTHTLSDDWALKVAGVYS KNTQDMEYAFPSGPVPVGATHTNTLMLGSIYDYDQVDYGFDAYVDGTFDAFGQAHELIVGANASRSHKDDFYAVAALPQRQDIFNPDHHLPRPDEGYYLA NASRGGPVDMRIQQYGAYSLARLKLADPLTVVVGSRVSWYSSDSDSTTYWRGEGTPVSSKARESGQVTPFAAVLFDINDHLTTYASYTDIFTPQGGYKTI DGSSLKPLIGKSYELGIKGEWFEGRLNSAFNLFRTVQNDAAQDDPLCPDSSCSLNSGKVRAQGFEAEISGEVIERLQLLAGYTYTQSKVLEDAQPDQKGL AYTSYVPRHLLRVWADYALTGALERVTLGAGVNAQSSNYRVSPISGNDVSQAGYAVWNGRIGYRIDDTWSVALNGNNLFDKRYYASIGTEGFGNFYGEPR NVVMSLKADF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site