Pseudomonas fluorescens AU12597, AA053_RS14885

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12597 Contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGAAAGCTGGCGAAAATGCCGCCAAGGTCAAGCTGACACTGCCCGATGGCAGTGAGTATGGTCAGGAAGGCCGCCTTGAATTCAGCGAAGTCTCGGTCGA CGAAACCACCGGTTCGGTGACCTTGCGCGCCGTATTCCCCAACCCTGATGAAATCCTCTTGCCTGGCATGTTTGTGCACGCGCAACTGGAAGCCGGTATC GACAGCAATGCAATCCTCGCGCCTCAAGTGGGCGTGACCCACAACCTCAAAGGTCAACCGACAGCATTGATTGTCGGCCCGGACAACAAGGTTGAGCTGC GTGTGCTTGAAGCATCGCGCACCGTGGGCAGCGACTGGCTGGTCGAGAAAGGCCTGAACCCGGGCGATCGCCTGATTACTGACGGCCTGCAATTCATCAA GCCTGGCGTTGAAGTCAAAATCATGGAAAAACCACAAGGCGCAACCCCGGCATCTGCCCCGGCAACAGAAAAAGCTGCAGGCAGTAAAGGGGAATAAACC
DNA Sequence for Gene
>AA053_RS14885
ATGTCGAAATTTTTTATCGACCGTCCGATTTTCGCTTGGGTAATCGCCCTTGTGATCATGCTGGTCGGGGCACTTTCGATCTTGAAACTGCCAATCAACC AGTACCCGAGCATCGCGCCACCGGCCATCTCGATCTCCGTGACCTATCCGGGTGCTTCGGCACAAACCGTACAGGACACCGTGGTTCAGGTGATCGAGCA ACAGCTCAACGGTATTGACCACTTGCGTTATGTGTCGTCTGAAAGTAACTCCGACGGCAGCATGACCATCACCGCGACCTTTGAGCAAGGGACTGACCCG GACACCGCCCAGGTGCAGGTGCAGAACAAGCTCAACCTGGCCACCCCGCTGCTGCCCCAAGAGGTTCAGCAGCAAGGTATCCGTGTGACCAAGGCAGTGA AAAACTTCCTGATGGTTATCGGCGTGGTGTCTGAAGACGGCAGTATGAACAAGGATGACTTGTCCAACTACATCGTCTCCAACATGCAAGACCCGATCTC CCGTACCGAAGGTGTGGGTGACTTCCAGGTGTTTGGTGCCCAGTACGCCATGCGCATCTGGCTCGACCCGGCCAAGCTGAACAAGTACAACCTGACCCCG ATTGACGTTAAGTCCGCCATTTCCTCGCAGAACGTACAGGTGTCTTCCGGGCAACTGGGCGGCCTGCCAGCGGTCAAAGGCCAGGAACTGAACGCCACCA TCATCGGCAAGACGCGCCTGCAAACTGCCGAAGAGTTCAAAAAGATCCTGCTCAAGGTCAACACCGACGGCTCGCAAGTACGCTTGCATGATGTCGCCGA AGTCGGCCTGGGTGGTGAAAACTACAGCATCAGTGCGCAGTACAACGGCAAGCCGTCCTCGGGCCTTGCAATCAAGCTGGCGACCGGTGCCAACGCACTG GACACCGCCAAGGCGCTGCATAAAACCATCGACGACCTGGCCCCGTTTTTCCCGCCCGGCATGAAAGTGGTTTACCCGTACGACACCACGCCCGTGGTAT CGGCCTCGATCAAAGGGGTGGTTGAAACCCTGGTCGAAGCGGTTGCGCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACTTCCGCGCCACCATCAT CACGACGATGACCGTGCCAGTGGTATTGCTCGGTACTTTCGGGATCCTGGCGGCGGCCGGTTTCAGTATCAACACCTTGACCATGTTCGGCATGGTACTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTGGTGGTGGAAAACGTCGAACGGGTCATGAGCGAAGAAGGCCTGCCCCCCAAAGAAGCCACCAAGAAAT CCATGGAGCAAATCCAGGGAGCGCTGGTCGGTATTGCCTTGGTGCTGTCAGCCGTACTGCTACCCATGGCGTTCTTCAGCGGCTCGACCGGTGTGATCTA CAAGCAGTTCTCGATCACCATTGTTTCGGCAATGGCGCTTTCGGTACTGGTTGCCCTGATCTTCACCCCGGCCCTGTGCGCCACCATGCTTAAGCCGGTC AAGAAAGGCGACCATGGTGAGAACAAGCGCGGCTTCTTCGGCTGGTTCAACCGCACGTTCGACAGCGGTGTAAAACGCTACGAGAAAGGTGTCGGCAGCA TCCTGCGCCACAAAGCGCCGTACTTGCTGGCCTATGTCTTGATCGTTGTCGGCATGGTGTTCCTGTTTACCCGCATCCCGACCTCGTTCCTGCCGGAAGA AGACCAGGGCGTTCTCTTCGCTCAGGTACAAACCCCGGCCGGTACAACCGCAGAACGCACCCAGGTCGTGATTGACCGCATGCGTGAATACTTGCTGACA GACGAGTCGGCGGCCGTGTCCTCGGTCTTTACCGTTAACGGCTTTAACTTCGCCGGTCGCGGCCAAAGCTCAGGCCTGGCGTTCATCATGCTCAAACCGT GGGCCGACCGTGATGCCGATAACAGCGTATTTGCGCTGGCGGCACGTGCTCAGGCGCACTTCTCCACCTTCCGTGACGCCATGGTGTTTGCCTTTGCTCC GCCGGCCGTAATGGAGCTGGGTAACGCCACTGGCTTTGACGTGTACCTGCAAGACCGTGCCGGTATTGGCCACGAAAAGTTGATGCAAGCCCGTAACCAG TTCTTGGGCATGGCATCGCAGAGCAAAATCCTGGCAGGCGTGCGTCCTAACGGCCTGAACGATGAACCTCAGTACCAGCTGGAAATCGATGACGAAGCAG CCCGCGCCCTTGGCGTAGGTCTGAGCGACATCAACAACACCCTGTCCATCGGTCTGGGTGCCAGCTATGTCAACGACTTCATCGACCGTGGTCGTGTGAA AAAGGTCTATCTGCAAGGCGAAGCTGACTCGCGGATGAACCCCGAAGACCTGAAAAAATGGTATGTGCGCAACGCTGAAGGAACCATGGTGCCGTTCTCT GCATTTGCCAAGGGCAAGTGGATTTACGGTGCGCCGAAGCTGTCGCGTTACAACGGCGTAGAAGCCATGGAAATCCTGGGCGCCCCGGCACCCGGCTACA GCAGTGGTGAAGCCATGGCTGAAGTCGAAGCACTGGCCAAGAAGCTGCCGGCAGGCGTCGGTATTTCCTGGACCGGCCTGTCCTACGAGGAGCGTCTGTC AGGTTCTCAAGCACCTGCGCTGTATGCGATTTCCTTGTTGATGGTGTTCCTGTGTCTCGCGGCACTGTATGAAAGCTGGTCGATTCCGATTGCGGTCATG CTGGTGGTGCCTCTGGGGATTATCGGTGCACTGCTGGCCACTAGCCTGCGGGGGCTGTCCAACGACGTGTACTTCCAGGTGGGCTTGCTGACGACCATCG GTCTGGCCTCGAAAAACGCCATCCTGATCGTCGAGTTCGCCAAAGAGCTGCACGAACAAGGGCGAACCTTGACCGAAGCCGCCATTGAAGCCTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCGCTGGCGTTCGTACTGGGCGTTATCCCGCTGGCCATTTCTTCGGGCGCAGGTTCGGGTAGCCAGCACGCCATT GGTACAGGTGTGATCGGCGGTATGATCACTGCAACTGTTCTAGCCGTGTTCTGGGTGCCGCTGTTCTTCGTCGCGGTGTCGTCCTTCGGCAGCGGCAAGG ACAACGACCCGGAAAAGAAAGTGGACCTGACTAAAACTCCAAATCAAGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTTCTCGCAGTCGCCGTAGCAGCGTTTACGCTGGGCGGCTGCTCGCTGATCCCTGACTACCAGCGCCCTGAAGCGCCGGTAGCAGCGCAATA CCCGCAAGGCCCGGCCTACAAGCCTAACGAAGCGCCAGCTCAAGCGGCTGCAGAACAAGGCTGGCGTGAGTTTTTCCGCGACCCGGCCCTGCAACAGTTG ATTCAGACAGCTCTGGTGAACAACCGCGACCTTCGGGTCGCGGCCCTGAACATTGATGCGTATGCCGCGCAGTACCGTATTCAACGTGCCGATCTGTTCC CGGCGGTGACGGCCAATGCCAGCGGCAGCCGTCAACGAATGCCAGCACGCCTGTCGCAAACGGGCGAGTCAGGCATCACCAGCCAATATTCGGCGACCCT CGGGGTCAGCGCGTACGAGCTGGATCTGTTCGGTCGCGTTCGCAGCCTGAGCGATCAGGCCTTGCAGAACTACTTTGCGACTGAAGAAGCCCGACGCACC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAISISVTYPGASAQTVQDTVVQVIEQQLNGIDHLRYVSSESNSDGSMTITATFEQGTDP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGVVSEDGSMNKDDLSNYIVSNMQDPISRTEGVGDFQVFGAQYAMRIWLDPAKLNKYNLTP IDVKSAISSQNVQVSSGQLGGLPAVKGQELNATIIGKTRLQTAEEFKKILLKVNTDGSQVRLHDVAEVGLGGENYSISAQYNGKPSSGLAIKLATGANAL DTAKALHKTIDDLAPFFPPGMKVVYPYDTTPVVSASIKGVVETLVEAVALVFLVMFLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLPPKEATKKSMEQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMALSVLVALIFTPALCATMLKPV KKGDHGENKRGFFGWFNRTFDSGVKRYEKGVGSILRHKAPYLLAYVLIVVGMVFLFTRIPTSFLPEEDQGVLFAQVQTPAGTTAERTQVVIDRMREYLLT DESAAVSSVFTVNGFNFAGRGQSSGLAFIMLKPWADRDADNSVFALAARAQAHFSTFRDAMVFAFAPPAVMELGNATGFDVYLQDRAGIGHEKLMQARNQ FLGMASQSKILAGVRPNGLNDEPQYQLEIDDEAARALGVGLSDINNTLSIGLGASYVNDFIDRGRVKKVYLQGEADSRMNPEDLKKWYVRNAEGTMVPFS AFAKGKWIYGAPKLSRYNGVEAMEILGAPAPGYSSGEAMAEVEALAKKLPAGVGISWTGLSYEERLSGSQAPALYAISLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALLATSLRGLSNDVYFQVGLLTTIGLASKNAILIVEFAKELHEQGRTLTEAAIEACRMRLRPIIMTSLAFVLGVIPLAISSGAGSGSQHAI GTGVIGGMITATVLAVFWVPLFFVAVSSFGSGKDNDPEKKVDLTKTPNQEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site